RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MBD3L2Q8NHZ7 208 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM54Q969K7 222 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF385AQ96PM9 386 aaKnown RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 SFXN3Q9BWM7 321 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF391Q9UJN7 358 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 EEF1E1-BLOC1S5C9J1V9 151 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NPIPA5E9PKD4 350 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 TRAF3IP2O43734 574 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 ZIC3O60481 467 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 MAGEA5P43359 124 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 TNFRSF9Q07011 255 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 EIF2B1Q14232 305 aaKnown RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NNATQ16517 81 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 LRRC37A5PQ49AS3 106 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 HSD17B11Q8NBQ5 300 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 OR2V1Q8NHB1 315 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 C1orf123Q9NWV4 160 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NPIPA1Q9UND3 350 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 TRBV6-6A0A0A6YYG2 114 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 PMS2P5A8MQ11 134 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 SAP30O75446 220 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 TRAPPC6AO75865 159 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NUDT14O95848 222 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 RENP00797 406 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 OR5AC1P0C628 307 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 LINC00614P0C842 121 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NR2C1P13056 603 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 CHATP28329 748 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 SLC16A1P53985 500 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 TAS2R46P59540 309 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 SELENOTP62341 195 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 EIF5AP63241 154 aaKnown RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF92Q03936 586 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 CACNG8Q8WXS5 425 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 WDYHV1Q96HA8 205 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 BBC3Q96PG8 261 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 DIRC2Q96SL1 478 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 P2RX4Q99571 388 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NAA60Q9H7X0 242 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 CHODLQ9H9P2 273 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 OR14J1Q9UGF5 321 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 COA3Q9Y2R0 106 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 KCNIP3Q9Y2W7 256 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 NPIPB11E5RHQ5 1161 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 OPRM1P35372 400 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 GATA4P43694 442 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 LHX2P50458 406 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 DLK1P80370 383 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 RAET1LQ5VY80 246 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 KCTD18Q6PI47 426 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 TEX43Q6ZNM6 134 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 C16orf47Q6ZP98 133 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 LIAT1Q6ZQX7 453 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 BHLHA15Q7RTS1 189 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 IL22RA2Q969J5 263 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 JSRP1Q96MG2 331 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-205ENST00000514271 MEMO1Q9Y316 297 aa6.29□□□□□ -1.4
CLIP1-205ENST00000514271 PINLYPA6NC86 204 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF814B7Z6K7 855 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CGAP01215 116 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 MTCP1P56278 107 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 OR2B8PP59922 312 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 EWSR1Q01844 656 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 FBXL19-AS1Q494R0 122 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 FBXW9Q5XUX1 488 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 LHFPL4Q7Z7J7 247 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 OR51G1Q8NGK1 321 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 OR4X1Q8NH49 305 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 KCNG3Q8TAE7 436 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM170AQ8WVE7 144 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 HES7Q9BYE0 225 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 ARHGAP21Q5T5U3 1957 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 FAM166BA8MTA8 275 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CDS2O95674 445 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CYB5R3P00387 301 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 TK1P04183 234 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM225BP0DP42 221 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 FUT3P21217 361 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CEACAM8P31997 349 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CD200P41217 278 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CLDN18P56856 261 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 NHLH2Q02577 135 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 ENDOGQ14249 297 aaKnown RBP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 OR8B8Q15620 311 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 PRSS8Q16651 343 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 EIF5AL1Q6IS14 154 aaKnown RBP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 TSEN15Q8WW01 171 aaKnown RBP6.28□□□□□ -1.4
CLIP1-205ENST00000514271 SUCNR1Q9BXA5 334 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 RPS10P5Q9NQ39 176 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 CLCF1Q9UBD9 225 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 KIAA2026Q5HYC2 2103 aa6.28□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF727A8MUV8 499 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 P2RY10O00398 339 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 OR2C1O95371 312 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms