RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 C11orf88Q6PI97 169 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 C16orf82Q7Z2V1 217 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 LINC00311Q8N616 119 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 OR51D1Q8NGF3 324 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 OR4F5Q8NH21 305 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 NDNFQ8TB73 568 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 AJUBAQ96IF1 538 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 SSX3Q99909 188 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 CHIAQ9BZP6 476 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 MMP28Q9H239 520 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 SEPSECSQ9HD40 501 aaKnown RBP6.63□□□□□ -1.35
NEDD4-210ENST00000513957 ABCB10Q9NRK6 738 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 PLEKHJ1Q9NW61 149 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 KCNIP1Q9NZI2 227 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 DPM3Q9P2X0 92 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 FOXI3A8MTJ6 420 aaPredicted RBP6.62□□□□□ -1.35
NEDD4-210ENST00000513957 SERPINE3A8MV23 424 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 BUB1B-PAK6H3BSN5 160 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 J3QR06 171 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 TXNL1O43396 289 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 GPR137BO60478 399 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 MMP23AO75900 390 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 DIRAS3O95661 229 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 NAPSAO96009 420 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 OMGP23515 440 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 IL3RAP26951 378 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 BLVRBP30043 206 aaPredicted RBP6.62□□□□□ -1.35
NEDD4-210ENST00000513957 MNDAP41218 407 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 RAB7AP51149 207 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 MADCAM1Q13477 382 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 SSX2Q16385 188 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 C2orf76Q3KRA6 126 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 KHDC1LQ5JSQ8 128 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 NKAPLQ5M9Q1 402 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 LY6G6FQ5SQ64 297 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 DHRS7BQ6IAN0 325 aaPredicted RBP6.62□□□□□ -1.35
NEDD4-210ENST00000513957 SFXN4Q6P4A7 337 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 C12orf54Q6X4T0 127 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 ARL11Q969Q4 196 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 AKR1E2Q96JD6 320 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 GHITMQ9H3K2 345 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 BEX1Q9HBH7 125 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 ZNF286AQ9HBT8 521 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 C12orf4Q9NQ89 552 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 ING3Q9NXR8 418 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 ZNF581Q9P0T4 197 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 ABRACLQ9P1F3 81 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 JPT1Q9UK76 154 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 ETV7Q9Y603 341 aa6.62□□□□□ -1.35
NEDD4-210ENST00000513957 SOX21Q9Y651 276 aaPredicted RBP6.62□□□□□ -1.35
NEDD4-210ENST00000513957 A0A0A6YYH2 397 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 TMEM272A0A1B0GTI8 110 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 A0A1W2PRD5 423 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 A0A1W2PRF3 423 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 A0A1W2PRM7 423 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 MEX3AA1L020 520 aaKnown RBP6.61□□□□□ -1.35
NEDD4-210ENST00000513957 A6NJ64 397 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 C12orf77C9JDV5 145 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 LY6LH3BQJ8 138 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 H3BUX3 64 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 SDCBPO00560 298 aaPredicted RBP6.61□□□□□ -1.35
NEDD4-210ENST00000513957 TSPAN9O75954 239 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 RGS11O94810 467 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 NFYBP25208 207 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 ZNF137PP52743 207 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 RAG2P55895 527 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 OR10A3P58181 314 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 LOXL3P58215 753 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 MRPS15P82914 257 aaKnown RBP6.61□□□□□ -1.35
NEDD4-210ENST00000513957 PRB3Q04118 309 aaPredicted RBP6.61□□□□□ -1.35
NEDD4-210ENST00000513957 HMGN3Q15651 99 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 AWAT1Q58HT5 328 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 HES5Q5TA89 166 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 OR10K2Q6IF99 312 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 CDPF1Q6NVV7 123 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 ZNF880Q6PDB4 577 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 Q6ZTK2 550 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 C6orf201Q7Z4U5 140 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 LHFPL4Q7Z7J7 247 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 OR8H3Q8N146 312 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 OR10X1Q8NGY0 326 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 MRPL30Q8TCC3 161 aaKnown RBP6.61□□□□□ -1.35
NEDD4-210ENST00000513957 EDARADDQ8WWZ3 215 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 RPEQ96AT9 228 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 GALMQ96C23 342 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 DUX5Q96PT3 197 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 SULT4A1Q9BR01 284 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 NICN1Q9BSH3 213 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 NPFFR1Q9GZQ6 430 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 OR51E2Q9H255 320 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 C16orf95Q9H693 158 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 TAF9BQ9HBM6 251 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.61□□□□□ -1.35
NEDD4-210ENST00000513957 C1RLQ9NZP8 487 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 PSG11Q9UQ72 335 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 TCF19Q9Y242 345 aa6.61□□□□□ -1.35
NEDD4-210ENST00000513957 A0A0A6YYD4 124 aa6.6□□□□□ -1.35
NEDD4-210ENST00000513957 LOC100506127A0A0U1RQW1 187 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms