RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PPP1R1AQ13522 171 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 ZFP69Q49AA0 526 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 SPRNQ5BIV9 151 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 Q6ZPA2 131 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 NOXA1Q86UR1 476 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 LDLRAD3Q86YD5 345 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 TCTEX1D1Q8N7M0 179 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 ASCC1Q8N9N2 400 aaKnown RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 BVESQ8NE79 360 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 OR5T2Q8NGG2 359 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 OR52M1Q8NGK5 317 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 RTN4IP1Q8WWV3 396 aaPredicted RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 CCL17Q92583 94 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 NEUROG1Q92886 237 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 COQ2Q96H96 371 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 YPEL2Q96QA6 119 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 SEC22CQ9BRL7 303 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 BEX2Q9BXY8 128 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 LIME1Q9H400 295 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 BEX1Q9HBH7 125 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 RANGRFQ9HD47 186 aaPredicted RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 FAM212BQ9NTI7 297 aaPredicted RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 KIF25Q9UIL4 384 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 UBE2J1Q9Y385 318 aaPredicted RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 CREBBPQ92793 2442 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 ICE1Q9Y2F5 2266 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 DYSFO75923 2080 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 IGKV1-6A0A0C4DH72 117 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 TEX13DA0A0J9YY54 714 aaPredicted RBP8.22□□□□□ -1.09
TPM3-221ENST00000513769 hADV38S2A0JD32 116 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 ODAMA1E959 279 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 A1L4Q6 167 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 A6NNC1 897 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 F2RL2O00254 374 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 BET1O15155 118 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 MPPED1O15442 326 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 HSPA12AO43301 675 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 CYB5R3P00387 301 aaPredicted RBP8.22□□□□□ -1.09
TPM3-221ENST00000513769 CD8AP01732 235 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 CXCL3P19876 107 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 AADACP22760 399 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 NFYAP23511 347 aaPredicted RBP8.22□□□□□ -1.09
TPM3-221ENST00000513769 GLIPR1P48060 266 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 EIF2B2P49770 351 aaKnown RBP8.22□□□□□ -1.09
TPM3-221ENST00000513769 GZMKP49863 264 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 P2RX3P56373 397 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 PIGPP57054 158 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 SNTB1Q13884 538 aaKnown RBP8.22□□□□□ -1.09
TPM3-221ENST00000513769 HERPUD1Q15011 391 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 Q3ZCU0 254 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 ESCO2Q56NI9 601 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 LRRC10Q5BKY1 277 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 C11orf71Q6IPW1 123 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 ADAD2Q8NCV1 583 aaKnown RBP8.22□□□□□ -1.09
TPM3-221ENST00000513769 ZNRF1Q8ND25 227 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 OR10V1Q8NGI7 309 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 CAPSLQ8WWF8 208 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 NINJ1Q92982 152 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 ARL11Q969Q4 196 aa8.22□□□□□ -1.09
TPM3-221ENST00000513769 SPTBN1Q01082 2364 aaKnown RBP8.21□□□□□ -1.09
TPM3-221ENST00000513769 CHD3Q12873 2000 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 TRGV10A0A0A0MS01 117 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 DUXBA0A1W2PPF3 345 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 NKX6-3A6NJ46 265 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 ZNF729A6NN14 1252 aaPredicted RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 HMSDA8MTL9 139 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 C15orf65H3BRN8 121 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 NDUFB3O43676 98 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 IFNA21P01568 189 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 HBZP02008 142 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 RPS2P15880 293 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 C4BPBP20851 252 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 RBMXP38159 391 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 SUPT4H1P63272 117 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 ATXN7L3Q14CW9 347 aaPredicted RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 ZCCHC24Q8N2G6 241 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 BOLLQ8N9W6 283 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 DRAXINQ8NBI3 349 aaPredicted RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 OR52B4Q8NGK2 314 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 RAB1CQ92928 201 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 TMEM230Q96A57 120 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 RAB39BQ96DA2 213 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 C14orf79Q96F83 325 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.1
TPM3-221ENST00000513769 NMES1Q9C002 83 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 SLC5A7Q9GZV3 580 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 SLC2A9Q9NRM0 540 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 ZFP57Q9NU63 452 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 RDH8Q9NYR8 311 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 MGAT4CQ9UBM8 478 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 MIOXQ9UGB7 285 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 JPT1Q9UK76 154 aa8.21□□□□□ -1.1
TPM3-221ENST00000513769 KBTBD11-OT1A0A1B0GTJ5 212 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 A0A1W2PPH5 198 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 RNF212BA8MTL3 300 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 C12orf77C9JDV5 145 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 TMPRSS2O15393 492 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 CDS2O95674 445 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 COL8A2P25067 703 aa8.2□□□□□ -1.1
TPM3-221ENST00000513769 CEBPDP49716 269 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms