RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KBTBD11-OT1A0A1B0GTJ5 212 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 RNF212BA8MTL3 300 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 IGKV1-13P0DP09 117 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 SSTR5P35346 364 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 SLC9A3R2Q15599 337 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM155Q4W5P6 130 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 GSG1LQ6UXU4 331 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 LGI3Q8N145 548 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 FAM216BQ8N7L0 139 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 GAL3ST2Q9H3Q3 398 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 OR2S2Q9NQN1 319 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 CLN8Q9UBY8 286 aa12.63□□□□□ -0.39
SCLT1-209ENST00000511426 RBM7Q9Y580 266 aaKnown RBP12.63□□□□□ -0.39
SCLT1-209ENST00000511426 TRBV23-1A0A0A0MS06 115 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 TRAV39A0A0B4J263 110 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 C3orf85A0A1B0GTC6 90 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 H0Y980 276 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 ADAM20O43506 726 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 ZNF205O95201 554 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 IGHV2-70P01814 119 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 TFF1P04155 84 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 DNASE1P24855 282 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 Q3ZCU0 254 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 PHLDA2Q53GA4 152 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 LIAT1Q6ZQX7 453 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 ZNF818PQ6ZRF7 136 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 ZNF645Q8N7E2 425 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 TCTEX1D1Q8N7M0 179 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 TPRX1Q8N7U7 411 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 RAB1CQ92928 201 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 RAB39BQ96DA2 213 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM246Q9BRR3 403 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 NMES1Q9C002 83 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 CHODLQ9H9P2 273 aa12.62□□□□□ -0.39
SCLT1-209ENST00000511426 IFNA21P01568 189 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 OR5AC1P0C628 307 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 RAB7AP51149 207 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM33P57088 247 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM187Q14656 261 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 ANKRD55Q3KP44 614 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 PDCD10Q9BUL8 212 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 CCL28Q9NRJ3 127 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 FAM212BQ9NTI7 297 aaPredicted RBP12.61□□□□□ -0.39
SCLT1-209ENST00000511426 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 NBASA2RRP1 2371 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 A0A1W2PPR1 153 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 NDUFB7P17568 137 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 F2RP25116 425 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 UCP1P25874 307 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 ESCO2Q56NI9 601 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 GLYATL2Q8WU03 294 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM56Q96MV1 263 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM222Q9H0R3 208 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 LIN7CQ9NUP9 197 aaKnown RBP12.61□□□□□ -0.39
SCLT1-209ENST00000511426 COMMD9Q9P000 198 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
SCLT1-209ENST00000511426 IGSF10Q6WRI0 2623 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 ARFGEF3Q5TH69 2177 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 PGLYRP1O75594 196 aaPredicted RBP12.6□□□□□ -0.39
SCLT1-209ENST00000511426 SELLP14151 372 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 DAOP14920 347 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 C4BPBP20851 252 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
SCLT1-209ENST00000511426 C17orf58Q2M2W7 97 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 C2orf68Q2NKX9 166 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
SCLT1-209ENST00000511426 CHIAQ9BZP6 476 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 GNG12Q9UBI6 72 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 GAB2Q9UQC2 676 aa12.6□□□□□ -0.39
SCLT1-209ENST00000511426 CACNA1DQ01668 2161 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 HMSDA8MTL9 139 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 HSD17B6O14756 317 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
SCLT1-209ENST00000511426 F12P00748 615 aaPredicted RBP12.59□□□□□ -0.39
SCLT1-209ENST00000511426 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 RPA2P15927 270 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 COL8A2P25067 703 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 EFNA4P52798 201 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 LOXL3P58215 753 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 MORN2Q502X0 79 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 DCAF12L2Q5VW00 463 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 C5orf24Q7Z6I8 188 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 OR52L2PQ8NGH6 319 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 METTL8Q9H825 291 aaKnown RBP12.59□□□□□ -0.39
SCLT1-209ENST00000511426 ZFP57Q9NU63 452 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 GFOD1Q9NXC2 390 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 IDI2-AS1Q9NZ38 188 aa12.59□□□□□ -0.39
SCLT1-209ENST00000511426 RAI1Q7Z5J4 1906 aaPredicted RBP12.58□□□□□ -0.39
SCLT1-209ENST00000511426 ADGRG4Q8IZF6 3080 aa12.58□□□□□ -0.39
SCLT1-209ENST00000511426 A0A1B0GW55 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 A0A1W2PPH5 198 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms