RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MNDAP41218 407 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 ARHGDIBP52566 201 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 MXD1Q05195 221 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 Q6ZS46 218 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 Q6ZTK2 550 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 OR56B1Q8NGI3 324 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 CENPOQ9BU64 300 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 RAB9BQ9NP90 201 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 A0A075B6Q4 140 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 IGHV3-72A0A0B4J1Y9 119 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 A0A1W2PPI3 338 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 SH2D7A6NKC9 451 aaPredicted RBP11.19□□□□□ -0.62
DDX41-212ENST00000511040 NOTOA8MTQ0 251 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 HSD17B6O14756 317 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 NAPSAO96009 420 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 SNRNP70P08621 437 aaKnown RBP11.19□□□□□ -0.62
DDX41-212ENST00000511040 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
DDX41-212ENST00000511040 KIR2DS4P43632 304 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 ZNF134P52741 427 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 BLCAPP62952 87 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 HNF4GQ14541 408 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 HMGN3Q15651 99 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 HIST2H2BDQ6DRA6 164 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 MOB3BQ86TA1 216 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 ZNF439Q8NDP4 499 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 OR2T6Q8NHC8 308 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 RANBP3Q9H6Z4 567 aaPredicted RBP11.19□□□□□ -0.62
DDX41-212ENST00000511040 ZNF696Q9H7X3 374 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 DAPK2Q9UIK4 370 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 HSF4Q9ULV5 492 aa11.19□□□□□ -0.62
DDX41-212ENST00000511040 VSIG10L2P0DP72 767 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 SNRPBP14678 240 aaKnown RBP11.18□□□□□ -0.62
DDX41-212ENST00000511040 RANBP1P43487 201 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 RAB7AP51149 207 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 HES1Q14469 280 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 TMEM95Q3KNT9 176 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 MORN2Q502X0 79 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 ZNF880Q6PDB4 577 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 SLC25A48Q6ZT89 311 aaKnown RBP11.18□□□□□ -0.62
DDX41-212ENST00000511040 TPRA1Q86W33 373 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 C8orf31Q8N9H6 132 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 GALMQ96C23 342 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 RAB3CQ96E17 227 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 RBMXL1Q96E39 390 aaKnown RBP11.18□□□□□ -0.62
DDX41-212ENST00000511040 CMSS1Q9BQ75 279 aaKnown RBP11.18□□□□□ -0.62
DDX41-212ENST00000511040 OCSTAMPQ9BR26 566 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 SLC25A33Q9BSK2 321 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 ATG5Q9H1Y0 275 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 ABRACLQ9P1F3 81 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
DDX41-212ENST00000511040 GAPDHP04406 335 aaKnown RBP11.17□□□□□ -0.62
DDX41-212ENST00000511040 FAM106CPP0CH98 169 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 GNB3P16520 340 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 RAB6AP20340 208 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 IL3RAP26951 378 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 TGFBR1P36897 503 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 TMEM30BQ3MIR4 351 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
DDX41-212ENST00000511040 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 MOB1BQ7L9L4 216 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 ZNF554Q86TJ5 538 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 OR8H3Q8N146 312 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 OR10R2Q8NGX6 335 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 LGALS14Q8TCE9 139 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 CFHR4Q92496 578 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 YIPF6Q96EC8 236 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 RBM14Q96PK6 669 aaKnown RBP11.17□□□□□ -0.62
DDX41-212ENST00000511040 CITED1Q99966 193 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 RIMS4Q9H426 269 aaPredicted RBP11.17□□□□□ -0.62
DDX41-212ENST00000511040 Q9N2K0 584 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
DDX41-212ENST00000511040 TRBV6-6A0A0A6YYG2 114 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 IGHV1-3A0A0C4DH29 117 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 RAB27BO00194 218 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 OR2F2O95006 317 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 CD3GP09693 182 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
DDX41-212ENST00000511040 HLA-DRB3P79483 266 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 HTD2P86397 168 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
DDX41-212ENST00000511040 ABCA11PQ4W5N1 156 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 IDNKQ5T6J7 187 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
DDX41-212ENST00000511040 SGMS2Q8NHU3 365 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms