RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ABCG5Q9H222 651 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 OR51J1Q9H342 316 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 NMNAT1Q9HAN9 279 aaPredicted RBP4.34□□□□□ -1.71
USP53-206ENST00000510737 PLEKHA3Q9HB20 300 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 SLC25A37Q9NYZ2 338 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 ABCD2Q9UBJ2 740 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 CYB5R1Q9UHQ9 305 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 RIMS3Q9UJD0 308 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 POLR1DQ9Y2S0 133 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 FBXO7Q9Y3I1 522 aa4.34□□□□□ -1.71
USP53-206ENST00000510737 TNCP24821 2201 aa4.34□□□□□ -1.72
USP53-206ENST00000510737 IGHV3-16A0A0C4DH30 117 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 IZUMO1RA6ND01 250 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 RPL37AP8A6NKH3 93 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 TMEM210A6NLX4 147 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 ZNF850A8MQ14 1090 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 FAM220BPB1ANY3 271 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 LINC01619G3V211 115 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 K7N7A8 449 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 SLC1A7O00341 560 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 XKRYO14609 159 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 CD14P08571 375 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 IFI30P13284 250 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 ARHGDIBP52566 201 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 PITPNAQ00169 270 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 FGD3Q5JSP0 725 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 DRAM2Q6UX65 266 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 IL34Q6ZMJ4 242 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 LYG2Q86SG7 212 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 CNPY4Q8N129 248 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 C4orf33Q8N1A6 199 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 DEFB125Q8N687 156 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 ZNF781Q8N8C0 355 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 OR56B4Q8NH76 319 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 SPTSSAQ969W0 71 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 KCTD7Q96MP8 289 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 NRIP2Q9BQI9 281 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 RTL8AQ9BWD3 113 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 C20orf27Q9GZN8 174 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 OR51I2Q9H344 312 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 IKZF5Q9H5V7 419 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 TMEM38AQ9H6F2 299 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 IL1RAPQ9NPH3 570 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 PLSCR3Q9NRY6 295 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 RASL12Q9NYN1 266 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 ZNF319Q9P2F9 582 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 PSMC3IPQ9P2W1 217 aaPredicted RBP4.33□□□□□ -1.72
USP53-206ENST00000510737 B9D1Q9UPM9 204 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 MED31Q9Y3C7 131 aa4.33□□□□□ -1.72
USP53-206ENST00000510737 hCG_38984A0A1B0GV85 526 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 M0R2N4 97 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 RIPK2O43353 540 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 ABHD2P08910 425 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 RPS27P42677 84 aaKnown RBP4.32□□□□□ -1.72
USP53-206ENST00000510737 OR1E2P47887 323 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 RAB9AP51151 201 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 PRKXP51817 358 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 EDDM3BP56851 147 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 MEF2CQ06413 473 aaPredicted RBP4.32□□□□□ -1.72
USP53-206ENST00000510737 PRDX4Q13162 271 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 DIAPH2-AS1Q14236 149 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 HES1Q14469 280 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 ZNF79Q15937 498 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 OAFQ86UD1 273 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 PGAM4Q8N0Y7 254 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 TPRX1Q8N7U7 411 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 Q8N9W7 124 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 OR13C2Q8NGS9 318 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 ZNF671Q8TAW3 534 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 ZNF596Q8TC21 504 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 TSEN15Q8WW01 171 aaKnown RBP4.32□□□□□ -1.72
USP53-206ENST00000510737 AQP3Q92482 292 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 RGP1Q92546 391 aaPredicted RBP4.32□□□□□ -1.72
USP53-206ENST00000510737 C11orf52Q96A22 123 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 REEP6Q96HR9 211 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 HSPB9Q9BQS6 159 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 PAPOLGQ9BWT3 736 aaKnown RBP4.32□□□□□ -1.72
USP53-206ENST00000510737 TOLLIPQ9H0E2 274 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 ZNF286AQ9HBT8 521 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 APLNQ9ULZ1 77 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 MPC1Q9Y5U8 109 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 WSB1Q9Y6I7 421 aa4.32□□□□□ -1.72
USP53-206ENST00000510737 ANXA2P2A6NMY6 339 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 NCBP2LA6PVI3 153 aaKnown RBP4.31□□□□□ -1.72
USP53-206ENST00000510737 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 OOSP1A8MZH6 123 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 ZNF732B4DXR9 585 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 H0Y980 276 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 K7EQG2 157 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 XRCC2O43543 280 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 ZNF737O75373 536 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 CST4P01036 141 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 IGKV1D-33P01593 117 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 IGKV1-33P01594 117 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 CD7P09564 240 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 RBMY1CP0DJD4 496 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 PSKH1P11801 424 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 GPX2P18283 190 aa4.31□□□□□ -1.72
USP53-206ENST00000510737 VDAC1P21796 283 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms