RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 MYPOPQ86VE0 399 aaPredicted RBP2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF584Q8IVC4 421 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 BAP18Q8IXM2 172 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SPEM1Q8N4L4 309 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF561Q8N587 486 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 COMMD1Q8N668 190 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ARL6IP6Q8N6S5 226 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF676Q8N7Q3 588 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 LRRC75AQ8NAA5 344 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZSCAN4Q8NAM6 433 aaPredicted RBP2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 OR2L3Q8NG85 312 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 OR4E2Q8NGC2 313 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 OR51D1Q8NGF3 324 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 OR10AC1Q8NH08 325 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 M1APQ8TC57 530 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 TSEN15Q8WW01 171 aaKnown RBP2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 TCTEX1D2Q8WW35 142 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 AQP3Q92482 292 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 TMEM106AQ96A25 262 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 PTX4Q96A99 478 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 FAM3DQ96BQ1 224 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SGK3Q96BR1 496 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SDSLQ96GA7 329 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SMIM10Q96HG1 83 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SEC22AQ96IW7 307 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF285Q96NJ3 590 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 YPEL4Q96NS1 127 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 CLCC1Q96S66 551 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 NMNAT3Q96T66 252 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 PHB2Q99623 299 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SLC6A7Q99884 636 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 TIMM29Q9BSF4 260 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 NUDT9Q9BW91 350 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SELENOIQ9C0D9 397 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 ATG5Q9H1Y0 275 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SYT4Q9H2B2 425 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 XKR8Q9H6D3 395 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 TUBA4BQ9H853 241 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 UCK1Q9HA47 277 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 FN3KRPQ9HA64 309 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 RHOFQ9HBH0 211 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 LYRM4Q9HD34 91 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 TREM2Q9NZC2 230 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 CCL26Q9Y258 94 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 HDGFL3Q9Y3E1 203 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 WIF1Q9Y5W5 379 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 SLC22A7Q9Y694 548 aa2.42□□□□□ -2.02
CALCOCO2-216ENST00000509784 HCFC1P51610 2035 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 A0A087WUJ7 227 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 PPIAL4CA0A0B4J2A2 164 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 METTL21EPA6NDL7 271 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 TMEM235A6NFC5 223 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CEACAM18A8MTB9 384 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF705EA8MWA4 302 aaPredicted RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 EEF1E1-BLOC1S5C9J1V9 151 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 C9JQL5 133 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RPL36A-HNRNPH2H7BZ11 118 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 TAAR5O14804 337 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 EFNA2O43921 213 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 GMFGO60234 142 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RAMP1O60894 148 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 MED6O75586 246 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 SCGNO76038 276 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 IFNA10P01566 189 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 IGKV1D-16P01601 117 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 GAPDHP04406 335 aaKnown RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CISD3P0C7P0 127 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CT45A10P0DMU9 189 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 PPIAL4GP0DN37 164 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 NQO2P16083 231 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CBR1P16152 277 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF14P17017 642 aaPredicted RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ALOX5APP20292 161 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RAB5AP20339 215 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 HTR2CP28335 458 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CD1CP29017 333 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CD80P33681 288 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 GPX4P36969 197 aaPredicted RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 AQP2P41181 271 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 CCR2P41597 374 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ACTR1BP42025 376 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RAB5CP51148 216 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 PRPS1P60891 318 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RAB2AP61019 212 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RPS15AP62244 130 aaKnown RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 SKP1P63208 163 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 BTN3A2P78410 334 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 PAX2Q02962 417 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 SRSF5Q13243 272 aaKnown RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 FAM53BQ14153 422 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RHEBQ15382 184 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ZNF141Q15928 474 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 HNRNPA1L2Q32P51 320 aaKnown RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ACTBL2Q562R1 376 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 MESTQ5EB52 335 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 RNASE10Q5GAN6 216 aaKnown RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 TMEM225Q6GV28 225 aa2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 EIF5AL1Q6IS14 154 aaKnown RBP2.41□□□□□ -2.02
CALCOCO2-216ENST00000509784 ULK3Q6PHR2 472 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms