RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RPL22L1Q6P5R6 122 aaKnown RBP12.31□□□□□ -0.44
RAB40C-202ENST00000509637 ZNF485Q8NCK3 441 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
RAB40C-202ENST00000509637 ZNF184Q99676 751 aaPredicted RBP12.31□□□□□ -0.44
RAB40C-202ENST00000509637 MRPL20Q9BYC9 149 aaKnown RBP12.31□□□□□ -0.44
RAB40C-202ENST00000509637 ZMAT5Q9UDW3 170 aaKnown RBP12.31□□□□□ -0.44
RAB40C-202ENST00000509637 A0A1W2PPK0 400 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 TRIM64CA6NLI5 447 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 MAGEB3O15480 346 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 LANCL1O43813 399 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 EGR2P11161 476 aaPredicted RBP12.3□□□□□ -0.44
RAB40C-202ENST00000509637 SPNP16150 400 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 VDAC1P21796 283 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 SLURP1P55000 103 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 PRR18Q8N4B5 295 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 ZFP41Q8N8Y5 198 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 MINDY2Q8NBR6 621 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 NEK7Q8TDX7 302 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 NABP2Q9BQ15 211 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 GON7Q9BXV9 100 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 OR51J1Q9H342 316 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 BANF2Q9H503 90 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 SMAD5-AS1Q9Y6J3 95 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 DNAH1Q9P2D7 4330 aa12.3□□□□□ -0.44
RAB40C-202ENST00000509637 LOC100130705A0A1B0GUX0 176 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 FCN1O00602 326 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 RRP9O43818 475 aaKnown RBP12.29□□□□□ -0.44
RAB40C-202ENST00000509637 GPX5O75715 221 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 LY86O95711 162 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 CSTBP04080 98 aaKnown RBP12.29□□□□□ -0.44
RAB40C-202ENST00000509637 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
RAB40C-202ENST00000509637 OR3A3P47888 321 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 RAB9AP51151 201 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 ACTBP60709 375 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
RAB40C-202ENST00000509637 MUL1Q969V5 352 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
RAB40C-202ENST00000509637 GNG12Q9UBI6 72 aa12.29□□□□□ -0.44
RAB40C-202ENST00000509637 TRBV5-7A0A0A0MS05 114 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 UBE2QL1A1L167 161 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 SC5DO75845 299 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 FRMD6-AS1P0C7T7 363 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 IL3RAP26951 378 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 PPP1CCP36873 323 aaKnown RBP12.28□□□□□ -0.44
RAB40C-202ENST00000509637 MMDQ15546 238 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 DMKNQ6E0U4 476 aaPredicted RBP12.28□□□□□ -0.44
RAB40C-202ENST00000509637 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 LINC00596Q86U02 117 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 HAPLN4Q86UW8 402 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 MRPL30Q8TCC3 161 aaKnown RBP12.28□□□□□ -0.44
RAB40C-202ENST00000509637 GHSRQ92847 366 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 MRPL48Q96GC5 212 aaKnown RBP12.28□□□□□ -0.44
RAB40C-202ENST00000509637 PGLYRP3Q96LB9 341 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 PARP12Q9H0J9 701 aaKnown RBP12.28□□□□□ -0.44
RAB40C-202ENST00000509637 TAF9BQ9HBM6 251 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 ISYNA1Q9NPH2 558 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 ETAA1Q9NY74 926 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 TRAPPC2LQ9UL33 140 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 PEX16Q9Y5Y5 336 aa12.28□□□□□ -0.44
RAB40C-202ENST00000509637 BIRC6Q9NR09 4857 aa12.27□□□□□ -0.44
RAB40C-202ENST00000509637 IGHV4OR15-8A0A075B7B6 117 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 A0A087WW49 117 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 HLA-DRB1P01911 266 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 GTF2F2P13984 249 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 RIPK1Q13546 671 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 CCDC58Q4VC31 144 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 GLIPR1L1Q6UWM5 242 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 Q8N1Y9 231 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 RDH12Q96NR8 316 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 TOLLIPQ9H0E2 274 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 PARP11Q9NR21 331 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 GAB2Q9UQC2 676 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 MRPS28Q9Y2Q9 187 aaKnown RBP12.27□□□□□ -0.45
RAB40C-202ENST00000509637 RPL36Q9Y3U8 105 aaKnown RBP12.27□□□□□ -0.45
RAB40C-202ENST00000509637 ORC6Q9Y5N6 252 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 STARD9Q9P2P6 4700 aa12.27□□□□□ -0.45
RAB40C-202ENST00000509637 TRAV41A0A0B4J266 112 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 MCRIP1C9JLW8 97 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 OVOL1O14753 267 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 NDUFA3O95167 84 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 CD2P06729 351 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 C6orf141Q5SZD1 244 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 ZNF833PQ6ZTB9 187 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 NPBQ8NG41 125 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 SMIM19Q96E16 107 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 CPNE2Q96FN4 548 aaPredicted RBP12.26□□□□□ -0.45
RAB40C-202ENST00000509637 Q96M66 194 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 Q96MT0 163 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 OR2S2Q9NQN1 319 aa12.26□□□□□ -0.45
RAB40C-202ENST00000509637 BABAM2Q9NXR7 383 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms