RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 QRFPP83859 136 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 MORN2Q502X0 79 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 LIPKQ5VXJ0 399 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 STEAP3Q658P3 488 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 TRAT1Q6PIZ9 186 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 TMEM91Q6ZNR0 172 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 PRR18Q8N4B5 295 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 OR52L2PQ8NGH6 319 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 OR2T10Q8NGZ9 312 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 SULT4A1Q9BR01 284 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 CST11Q9H112 138 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 GNG12Q9UBI6 72 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 TPRKBQ9Y3C4 175 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 DNAH9Q9NYC9 4486 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 SLC22A1O15245 554 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 IL3RAP26951 378 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 HTR2CP28335 458 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 UNC119Q13432 240 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 TMEM30BQ3MIR4 351 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 HSD17B12Q53GQ0 312 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 RBM48Q5RL73 367 aaKnown RBP14.16□□□□□ -0.14
TPM3-220ENST00000509601 ZNF554Q86TJ5 538 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 TGIF2LXQ8IUE1 241 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 Q8N9W7 124 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 TMEM203Q969S6 136 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 GFI1Q99684 422 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 FAAP24Q9BTP7 215 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 TM2D1Q9BX74 207 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 ANKRD60Q9BZ19 345 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 KCNK15Q9H427 330 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 RAB9BQ9NP90 201 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 OR2S2Q9NQN1 319 aa14.16□□□□□ -0.14
TPM3-220ENST00000509601 NCBP2LA6PVI3 153 aaKnown RBP14.15□□□□□ -0.14
TPM3-220ENST00000509601 TMEM14DPA8MWL7 114 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 IGLL1P15814 213 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 NKAPLQ5M9Q1 402 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 KCNG3Q8TAE7 436 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 CHPT1Q8WUD6 406 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 UFD1Q92890 307 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 NICN1Q9BSH3 213 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 ISYNA1Q9NPH2 558 aa14.15□□□□□ -0.14
TPM3-220ENST00000509601 A0A0A6YYD4 124 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 SERPINE3A8MV23 424 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 RGS10O43665 173 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 MOSP00540 346 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 PF4V1P10720 104 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 CD33P20138 364 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 CRHBPP24387 322 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 F2RL1P55085 397 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 RPS25P62851 125 aaKnown RBP14.14□□□□□ -0.15
TPM3-220ENST00000509601 HTD2P86397 168 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 GNMTQ14749 295 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 Q6ZPA2 131 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 C6orf201Q7Z4U5 140 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 SLC35E3Q7Z769 313 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 ODF3L1Q8IXM7 274 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 PHF21AQ96BD5 680 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 NEDD4LQ96PU5 975 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 S1PR3Q99500 378 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 TMEM59Q9BXS4 323 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 ABCG5Q9H222 651 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
TPM3-220ENST00000509601 YPEL1O60688 119 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 MAP2K4P45985 399 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 HMGN3Q15651 99 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 LY6G6FQ5SQ64 297 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 ZNF880Q6PDB4 577 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 C18orf65Q6ZTR6 163 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 STPG2Q8N412 459 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 YPEL2Q96QA6 119 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 LIN7CQ9NUP9 197 aaKnown RBP14.13□□□□□ -0.15
TPM3-220ENST00000509601 LRRC42Q9Y546 428 aa14.13□□□□□ -0.15
TPM3-220ENST00000509601 TXNL1O43396 289 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 LANCL1O43813 399 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 BPNT1O95861 308 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 NAPSAO96009 420 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 HSMCR30P0CW71 290 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 CPEP16870 476 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
TPM3-220ENST00000509601 GPR12P47775 334 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 RPL23AP62750 156 aaKnown RBP14.12□□□□□ -0.15
TPM3-220ENST00000509601 MLLT11Q13015 90 aaPredicted RBP14.12□□□□□ -0.15
TPM3-220ENST00000509601 ETV3LQ6ZN32 361 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 PRSS48Q7RTY5 328 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 REC114Q7Z4M0 266 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 FAM89BQ8N5H3 189 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 OR6M1Q8NGM8 313 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 RITA1Q96K30 269 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 LPAR5Q9H1C0 372 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 ZFP57Q9NU63 452 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 NECAP2Q9NVZ3 263 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 JPT1Q9UK76 154 aa14.12□□□□□ -0.15
TPM3-220ENST00000509601 AK6Q9Y3D8 172 aaKnown RBP14.12□□□□□ -0.15
TPM3-220ENST00000509601 FOXI3A8MTJ6 420 aaPredicted RBP14.11□□□□□ -0.15
TPM3-220ENST00000509601 SOCS1O15524 211 aa14.11□□□□□ -0.15
TPM3-220ENST00000509601 PF4P02776 101 aa14.11□□□□□ -0.15
TPM3-220ENST00000509601 BLVRBP30043 206 aaPredicted RBP14.11□□□□□ -0.15
TPM3-220ENST00000509601 TMEM50BP56557 158 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms