RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 P01737 135 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 CSN2P05814 226 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 GNLYP22749 145 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 CMPK1P30085 196 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 GABRA2P47869 451 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 EBPQ15125 230 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF324BQ6AW86 544 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 Q6ZSR6 202 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 AMIGO2Q86SJ2 522 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 C10orf82Q8WW14 230 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 RXFP2Q8WXD0 754 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 FAM19A4Q96LR4 140 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 TMEM222Q9H0R3 208 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 CACYBPQ9HB71 228 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 MED11Q9P086 117 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 SIPA1L1O43166 1804 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 GSC2O15499 205 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 EDF1O60869 148 aaKnown RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 NDUFB8O95169 186 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 NRASP01111 189 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 SLURP2P0DP57 97 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 FGF6P10767 208 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 PSG2P11465 335 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 RAB3BP20337 219 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 SOX3P41225 446 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 KIR2DS2P43631 304 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 P2RY6Q15077 328 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 SIX1Q15475 284 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 VRK3Q8IV63 474 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF843Q8N446 348 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF433Q8N7K0 673 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 TMEM54Q969K7 222 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 LYSMD1Q96S90 227 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 PITX2Q99697 317 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 OR52D1Q9H346 318 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 TMEM100Q9NV29 134 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 NAT8BQ9UHF3 227 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 RIMS3Q9UJD0 308 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 ST3GAL6Q9Y274 331 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 ADAMTSL1Q8N6G6 1762 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 LOC100131303A0A0U1RQF7 123 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 FABP5P3A8MUU1 101 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 INMT-MINDY4F8WBC2 141 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 MPPED1O15442 326 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 REM1O75628 298 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 SEMA4FO95754 770 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 NGFP01138 241 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 EVI2AP22794 236 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF92Q03936 586 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 MXD1Q05195 221 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF266Q14584 549 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 NSUN5P1Q3KNT7 163 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ANKRD22Q5VYY1 191 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF550Q7Z398 422 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ODF3L1Q8IXM7 274 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 OR5A1Q8NGJ0 315 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 TRIB3Q96RU7 358 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 SIX2Q9NPC8 291 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 RSL24D1Q9UHA3 163 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 HS3ST2Q9Y278 367 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ANKRD31Q8N7Z5 1873 aa6.09□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF726A6NNF4 738 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 J3QT63 122 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 ARL6IP5O75915 188 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 OPN1SWP03999 348 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 CPMP14384 443 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 PSMB9P28065 219 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 MARCKSL1P49006 195 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 NCS1P62166 190 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 SSX1Q16384 188 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 OLFML2AQ68BL7 652 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 IL34Q6ZMJ4 242 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 Q6ZRM9 215 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 CRIPAKQ8N1N5 446 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM86AQ8N2M4 240 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 C11orf42Q8N5U0 333 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 TMEM178AQ8NBL3 297 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 NEIL3Q8TAT5 605 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 GNB1LQ9BYB4 327 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 OR2D2Q9H210 308 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF224Q9NZL3 707 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC2A6Q9UGQ3 507 aa6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 YTHDF2Q9Y5A9 579 aaKnown RBP6.09□□□□□ -1.44
PDGFRA-206ENST00000508170 NRXN2Q9P2S2 1712 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 ARID2Q68CP9 1835 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 TRAV30A0A087WSZ9 112 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 RBFOX2O43251 390 aaKnown RBP eCLIP6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 CDK2AP2O75956 126 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 FABP3P05413 133 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 SLC35G6P0C7Q6 338 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 KLK2P20151 261 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 PRSS3P35030 304 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 LHX2P50458 406 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 FKBP1AP62942 108 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 LY6DQ14210 128 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 MORN2Q502X0 79 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 FAM201AQ5SY85 155 aa6.08□□□□□ -1.44
PDGFRA-206ENST00000508170 ZNF57Q68EA5 555 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms