RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 C2orf73Q8N5S3 287 aaPredicted RBP1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 CCDC127Q96BQ5 260 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 DNAJC30Q96LL9 226 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 SERPINB11Q96P15 392 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 CXCL16Q9H2A7 254 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 KIAA0232Q92628 1395 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 ARHGAP32A7KAX9 2087 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 PTPRJQ12913 1337 aa1.4□□□□□ -2.18
TOPBP1-204ENST00000505804 ATG2BQ96BY7 2078 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 A0A1W2PQL4 384 aaPredicted RBP1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 SULT1C2O00338 296 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 FBP1P09467 338 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 NQO1P15559 274 aaKnown RBP1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 GADD45AP24522 165 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 KCNJ3P48549 501 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 ZNF117Q03924 483 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 PDK2Q15119 407 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 MAPK14Q16539 360 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 FBXO48Q5FWF7 155 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 HENMT1Q5T8I9 393 aaKnown RBP1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 AADACL4Q5VUY2 407 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 Q6ZS52 159 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 YIPF7Q8N8F6 280 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 UPK3BQ9BT76 320 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 FAM206AQ9NX38 181 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 PSORS1C2Q9UIG4 136 aa1.4□□□□□ -2.19
TOPBP1-204ENST00000505804 GOLGA8QA0A0J9YX86 632 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 FADS2O95864 444 aaKnown RBP1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 SLC35E2BP0CK96 405 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 LIMS3P0CW19 117 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 LIMS4P0CW20 117 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 NQO2P16083 231 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 RWDD2BP57060 319 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 ZBTB6Q15916 424 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 TCAIMQ8N3R3 496 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 ANGPTL6Q8NI99 470 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 TMIGD2Q96BF3 282 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 C16orf95Q9H693 158 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 COMMD9Q9P000 198 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 SCML1Q9UN30 329 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 OTOGLQ3ZCN5 2332 aa1.39□□□□□ -2.19
TOPBP1-204ENST00000505804 NUP153P49790 1475 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 H3BRN7 92 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 CYTH3O43739 400 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 GP1BAP07359 652 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 ORM2P19652 201 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 PPP1CCP36873 323 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 LPAR6P43657 344 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 ETV1P50549 477 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 AKR1C2P52895 323 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 OR4D1Q15615 310 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 TMEM249Q2WGJ8 235 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 MRPL51Q4U2R6 128 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 TRMT12Q53H54 448 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 CENPWQ5EE01 88 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 TTC33Q6PID6 262 aaPredicted RBP1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 CCDC121Q6ZUS5 278 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 MTERF4Q7Z6M4 381 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 DOLPP1Q86YN1 238 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 OR11H1Q8NG94 326 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 OR4P4Q8NGL7 312 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 OR10A6Q8NH74 314 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 RORBQ92753 470 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 OR52B2Q96RD2 323 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 MED18Q9BUE0 208 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 SLC19A3Q9BZV2 496 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 CHST5Q9GZS9 411 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 GTSF1LQ9H1H1 148 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 SMDT1Q9H4I9 107 aa1.38□□□□□ -2.19
TOPBP1-204ENST00000505804 NCKAP5O14513 1909 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 ZNF879B4DU55 563 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 BRI3O95415 125 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 PRB1P04280 392 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 SLC35A2P78381 396 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 TIMM23BQ5SRD1 257 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 TMEM56Q96MV1 263 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 FAM210AQ96ND0 272 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 HBEGFQ99075 208 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 CYTH2Q99418 400 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 MRPS16Q9Y3D3 137 aaKnown RBP1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 FIS1Q9Y3D6 152 aa1.37□□□□□ -2.19
TOPBP1-204ENST00000505804 SLX4Q8IY92 1834 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 MUC21A0A0G2JKD1 596 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 MUC21A0A140T8X8 626 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 C19orf71A6NCJ1 209 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 H3BSA7 217 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 M0QYV0 167 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 PHYHO14832 338 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 LY6HO94772 140 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 IGHV3-30-3P0DP02 117 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 GZMBP10144 247 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 PSMB3P49720 205 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 PSMD7P51665 324 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 GTF2BQ00403 316 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 PRDX4Q13162 271 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 LGALS9CQ6DKI2 356 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 XKRXQ6PP77 449 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 COPS6Q7L5N1 327 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 TMEM75Q8N9X5 138 aa1.36□□□□□ -2.19
TOPBP1-204ENST00000505804 RNASEH2CQ8TDP1 164 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms