RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GJC3Q8NFK1 279 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 IFI44Q8TCB0 444 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 MRPL30Q8TCC3 161 aaKnown RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 MOB3AQ96BX8 217 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 OR4C12Q96R67 309 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 CDCA3Q99618 268 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 FOXJ2Q9P0K8 574 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 CBY1Q9Y3M2 126 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 FOXI3A8MTJ6 420 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CLDN1O95832 211 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 IGHMP01871 453 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 TCN2P20062 427 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 MSR1P21757 451 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CD81P60033 236 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 EIF3IQ13347 325 aaKnown RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 MMDQ15546 238 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 FAM189A2Q15884 450 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 ALKBH2Q6NS38 261 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF611Q8N823 705 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 POC1BQ8TC44 478 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 V9GYS6 101 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 ANKUB1A6NFN9 424 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 TUSC2O75896 110 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 GYPAP02724 150 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 PFN1P07737 140 aaKnown RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 C1QTNF9P0C862 333 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CBLN1P23435 193 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CD27P26842 260 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 MDH2P40926 338 aaKnown RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CNN1P51911 297 aaKnown RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 GRB2P62993 217 aaKnown RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 HOXA4Q00056 320 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CFHR1Q03591 330 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 GCSAMLQ5JQS6 135 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 SLC25A47Q6Q0C1 308 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 OR6X1Q8NH79 312 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 HSPB9Q9BQS6 159 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 SAMD10Q9BYL1 202 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 ACTR3CQ9C0K3 210 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-208ENST00000504387 CDH20Q9HBT6 801 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 MANBALQ9NQG1 85 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 TAAR3PQ9P1P4 343 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 VAX2Q9UIW0 290 aa6.53□□□□□ -1.36
NEDD9-208ENST00000504387 A0A096LPE4 126 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 A0A1W2PPZ6 126 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SLC22A20A6NK97 555 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 CD300LBA8K4G0 201 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 LMO7DNF2Z398 122 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 LILRA1O75019 489 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 BCL3P20749 454 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 GALNSP34059 522 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 MPLP40238 635 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 FASLGP48023 281 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 GPM6AP51674 278 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 LINC00205P59089 165 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 HIST1H3AP68431 136 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 RPP25LQ8N5L8 163 aaKnown RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SIGLEC12Q96PQ1 595 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SPIN2AQ99865 258 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SPIN2BQ9BPZ2 258 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 MOB1AQ9H8S9 216 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 DNAJC4Q9NNZ3 241 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 TRBV24-1A0A075B6N3 115 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF732B4DXR9 585 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 B4E171 279 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 KRASP01116 189 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 GCGP01275 180 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 TSPAN7P41732 249 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 ECI1P42126 302 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 MEF2BQ02080 365 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SHBQ15464 509 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 GUSBP11Q6P575 273 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SYT13Q7L8C5 426 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 YRDCQ86U90 279 aaKnown RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 OR5D13Q8NGL4 314 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 FGFBP3Q8TAT2 258 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 OR5P3Q8WZ94 311 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 NUDT16L1Q9BRJ7 211 aaKnown RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 TM2D1Q9BX74 207 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 LPAR2Q9HBW0 351 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 NAT8Q9UHE5 227 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 RARRES3Q9UL19 164 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 PTPRSQ13332 1948 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 ABCA1O95477 2261 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SLC17A3O00476 420 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 TNFSF11O14788 317 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 PDCD6O75340 191 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 CDS2O95674 445 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 SERPINA7P05543 415 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 VDAC1P21796 283 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 RAB4BP61018 213 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 BAXQ07812 192 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 PLPPR5Q32ZL2 321 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 LBHQ53QV2 105 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-208ENST00000504387 DBX2Q6ZNG2 339 aa6.52□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF808Q8N4W9 903 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms