RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 TMEM50BP56557 158 aa14.03□□□□□ -0.16
RHBDD3-207ENST00000496342 HMGN3Q15651 99 aa14.03□□□□□ -0.16
RHBDD3-207ENST00000496342 PRR31Q5SQ13 230 aa14.03□□□□□ -0.16
RHBDD3-207ENST00000496342 FAM89BQ8N5H3 189 aa14.03□□□□□ -0.16
RHBDD3-207ENST00000496342 ARHGAP5-AS1Q96IT6 56 aa14.03□□□□□ -0.16
RHBDD3-207ENST00000496342 CHMP1AQ9HD42 196 aaPredicted RBP14.03□□□□□ -0.16
RHBDD3-207ENST00000496342 IFITM5A6NNB3 132 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 OOSP1A8MZH6 123 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 NAPSAO96009 420 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 CLEC2LP0C7M8 214 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 GADD45AP24522 165 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 ARHGDIBP52566 201 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 HNF4GQ14541 408 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 ARSJQ5FYB0 599 aaPredicted RBP14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 CT45A1Q5HYN5 189 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 PLAC9Q5JTB6 97 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 CCDC144NLQ6NUI1 221 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 TRAT1Q6PIZ9 186 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 SLC16A12Q6ZSM3 486 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 Q8N2B8 174 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 LINC00311Q8N616 119 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 CT45A3Q8NHU0 189 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 RBM14Q96PK6 669 aaKnown RBP14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 CHCHD6Q9BRQ6 235 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 PECRQ9BY49 303 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 PRSS22Q9GZN4 317 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 ZNF696Q9H7X3 374 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 OR2S2Q9NQN1 319 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 KCNIP1Q9NZI2 227 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 WNK1Q9H4A3 2382 aa14.02□□□□□ -0.17
RHBDD3-207ENST00000496342 IGHV1-3A0A0C4DH29 117 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 FAM90A9PA6NNJ1 464 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 OR2F2O95006 317 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 TSPAN15O95858 294 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 IGKV1D-33P01593 117 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 IGKV1-33P01594 117 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 AMY1AP04745 511 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 AMY2AP04746 511 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 ZNF816Q0VGE8 651 aaPredicted RBP14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 HES1Q14469 280 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 ABCA11PQ4W5N1 156 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 SLC25A48Q6ZT89 311 aaKnown RBP14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 MOB3BQ86TA1 216 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 LYG1Q8N1E2 194 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 OCSTAMPQ9BR26 566 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 PARP12Q9H0J9 701 aaKnown RBP14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 LIN7BQ9HAP6 207 aa14.01□□□□□ -0.17
RHBDD3-207ENST00000496342 LOC100506127A0A0U1RQW1 187 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 ZNF736B4DX44 427 aaPredicted RBP14□□□□□ -0.17
RHBDD3-207ENST00000496342 H3BUI4 141 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 GALP22466 123 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 FGF9P31371 208 aaPredicted RBP14□□□□□ -0.17
RHBDD3-207ENST00000496342 TGFBR1P36897 503 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 RAB7AP51149 207 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 MORN2Q502X0 79 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 ZNF880Q6PDB4 577 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 IL1F10Q8WWZ1 152 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 ST6GALNAC6Q969X2 333 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 SSR3Q9UNL2 185 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 TRRAPQ9Y4A5 3859 aa14□□□□□ -0.17
RHBDD3-207ENST00000496342 A0A075B6Q4 140 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 LPLP06858 475 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 CD36P16671 472 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 TMEM11P17152 192 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 VDAC2P45880 294 aaPredicted RBP13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 PSMD7P51665 324 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 MXD1Q05195 221 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 HERPUD1Q15011 391 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 C9orf152Q5JTZ5 239 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 TREML4Q6UXN2 200 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 Q6ZTK2 550 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 OR8H3Q8N146 312 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 C8orf31Q8N9H6 132 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 RTN4IP1Q8WWV3 396 aaPredicted RBP13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 CENPOQ9BU64 300 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 JPT1Q9UK76 154 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 RAB22AQ9UL26 194 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 KCNK7Q9Y2U2 307 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 NBEAL1Q6ZS30 2694 aa13.99□□□□□ -0.17
RHBDD3-207ENST00000496342 GAPDHP04406 335 aaKnown RBP13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 CD28P10747 220 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 SNRPBP14678 240 aaKnown RBP13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 IL3RAP26951 378 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 SDC2P34741 201 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 HLA-DRB3P79483 266 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 C16orf82Q7Z2V1 217 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 ODF3L1Q8IXM7 274 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 OR56B1Q8NGI3 324 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 GALMQ96C23 342 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 CMSS1Q9BQ75 279 aaKnown RBP13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 ABHD14AQ9BUJ0 271 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 RAB9BQ9NP90 201 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 OR1A1Q9P1Q5 309 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 MOB4Q9Y3A3 225 aa13.98□□□□□ -0.17
RHBDD3-207ENST00000496342 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
RHBDD3-207ENST00000496342 ST8SIA5O15466 376 aa13.97□□□□□ -0.17
RHBDD3-207ENST00000496342 SCTP09683 121 aa13.97□□□□□ -0.17
RHBDD3-207ENST00000496342 FAM106CPP0CH98 169 aa13.97□□□□□ -0.17
RHBDD3-207ENST00000496342 GNB3P16520 340 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms