RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CD1BP29016 333 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 TAS2R43P59537 309 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 Q3ZCU0 254 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 LRRTM1Q86UE6 522 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 ODF3L1Q8IXM7 274 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 C8orf59Q8N0T1 100 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-208ENST00000494728 NANOGP1Q8N7R0 232 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 BPIFB6Q8NFQ5 453 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 OR52L2PQ8NGH6 319 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 OR2T10Q8NGZ9 312 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 MRPS24Q96EL2 167 aaKnown RBP9.13□□□□□ -0.95
VTI1A-208ENST00000494728 S1PR3Q99500 378 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 SULT4A1Q9BR01 284 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 TAF9BQ9HBM6 251 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 PLCXD1Q9NUJ7 323 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 MBNL3Q9NUK0 354 aaKnown RBP9.13□□□□□ -0.95
VTI1A-208ENST00000494728 CHCHD3Q9NX63 227 aaKnown RBP9.13□□□□□ -0.95
VTI1A-208ENST00000494728 GNG12Q9UBI6 72 aa9.13□□□□□ -0.95
VTI1A-208ENST00000494728 LSM2Q9Y333 95 aaKnown RBP9.13□□□□□ -0.95
VTI1A-208ENST00000494728 SORL1Q92673 2214 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 A0A0A6YYD4 124 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 AP4M1O00189 453 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 PDCD6O75340 191 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 MOSP00540 346 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 CD1AP06126 327 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 SLC2A2P11168 524 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-208ENST00000494728 MYF6P23409 242 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 PPP1CCP36873 323 aaKnown RBP9.12□□□□□ -0.95
VTI1A-208ENST00000494728 LUMP51884 338 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-208ENST00000494728 UNC119Q13432 240 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 LSAMPQ13449 338 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 GPR176Q14439 515 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 NKAPLQ5M9Q1 402 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 C6orf183Q5T699 404 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 ZNF695Q8IW36 515 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 FOXRED2Q8IWF2 684 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 STX19Q8N4C7 294 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 NKAIN3Q8N8D7 197 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 NICN1Q9BSH3 213 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 MRPL20Q9BYC9 149 aaKnown RBP9.12□□□□□ -0.95
VTI1A-208ENST00000494728 SPACA1Q9HBV2 294 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 C8orf4Q9NR00 106 aa9.12□□□□□ -0.95
VTI1A-208ENST00000494728 DYNC2H1Q8NCM8 4307 aaKnown RBP9.11□□□□□ -0.95
VTI1A-208ENST00000494728 FAM90A10PA6NDY2 464 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 FAM90A7PA6NKC0 464 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 FAM90A23PA8MXZ1 464 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 H0YHG0 523 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 SPINT2O43291 252 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 VSIG8P0DPA2 414 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
VTI1A-208ENST00000494728 FUT3P21217 361 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 IL3RAP26951 378 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 CHATP28329 748 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 OR3A3P47888 321 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 MED21Q13503 144 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 GPR50Q13585 617 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 MORN2Q502X0 79 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 CDH26Q8IXH8 852 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 RNF152Q8N8N0 203 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 OR51D1Q8NGF3 324 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 GFI1Q99684 422 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 ABHD14AQ9BUJ0 271 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 TMED9Q9BVK6 235 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 PARP12Q9H0J9 701 aaKnown RBP9.11□□□□□ -0.95
VTI1A-208ENST00000494728 IFI27L2Q9H2X8 130 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 DCLRE1BQ9H816 532 aa9.11□□□□□ -0.95
VTI1A-208ENST00000494728 NKX1-2Q9UD57 310 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-208ENST00000494728 ZNF107Q9UII5 783 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-208ENST00000494728 SAA2-SAA4A0A096LPE2 208 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 TXNL1O43396 289 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 LANCL1O43813 399 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 DUS4LO95620 317 aaKnown RBP9.1□□□□□ -0.95
VTI1A-208ENST00000494728 CDK1P06493 297 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 SAA2P0DJI9 122 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-208ENST00000494728 HTR2CP28335 458 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 MYCNOSP40205 109 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 RPS27AP62979 156 aaKnown RBP9.1□□□□□ -0.95
VTI1A-208ENST00000494728 SLC35B1P78383 322 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 NDPQ00604 133 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 GABPB1Q06547 395 aaPredicted RBP9.1□□□□□ -0.95
VTI1A-208ENST00000494728 HMGN3Q15651 99 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 TMEM30BQ3MIR4 351 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 ACSM3Q53FZ2 586 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 TEX38Q6PEX7 206 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 UNQ9370/PRO34162Q6UXP9 181 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 C6orf201Q7Z4U5 140 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 SVOPQ8N4V2 548 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 NABP2Q9BQ15 211 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 UQCC2Q9BRT2 126 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 OR2S2Q9NQN1 319 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
VTI1A-208ENST00000494728 G3V318 75 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 CCL24O00175 119 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 CA11O75493 328 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 IGHG4P01861 327 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 PSMB8P28062 276 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 SOX6P35712 828 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 RAB25P57735 213 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms