RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 BET1O15155 118 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 YPEL1O60688 119 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PROP1O75360 226 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PGLYRP1O75594 196 aaPredicted RBP5.63□□□□□ -1.51
MSH5-217ENST00000494458 SIX6O95475 246 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 CYB5R3P00387 301 aaPredicted RBP5.63□□□□□ -1.51
MSH5-217ENST00000494458 TFF1P04155 84 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PPIAL4FP0DN26 164 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PGAM2P15259 253 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 HERV-K104P61576 105 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 C17orf58Q2M2W7 97 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 Q3ZCU0 254 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 ESCO2Q56NI9 601 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 FAM201AQ5SY85 155 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 C11orf88Q6PI97 169 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 ZNF841Q6ZN19 808 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 TCF23Q7RTU1 214 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 ZNF843Q8N446 348 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 ZNF565Q8N9K5 539 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 CCDC71LQ8N9Z2 235 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 ZBTB8BQ8NAP8 495 aaPredicted RBP5.63□□□□□ -1.51
MSH5-217ENST00000494458 ZNRF1Q8ND25 227 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 OR10V1Q8NGI7 309 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 OR1L1Q8NH94 360 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 ZNF596Q8TC21 504 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 YPEL2Q96QA6 119 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 SPOCK3Q9BQ16 436 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 RNF126Q9BV68 326 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 GON7Q9BXV9 100 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 CCL28Q9NRJ3 127 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 RDH8Q9NYR8 311 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 TAS2R3Q9NYW6 316 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 KCNIP1Q9NZI2 227 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 OR6C3Q9NZP0 311 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 OR1A1Q9P1Q5 309 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 DNAJB11Q9UBS4 358 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 PPIAL4AQ9Y536 164 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 KLF2Q9Y5W3 355 aaPredicted RBP5.63□□□□□ -1.51
MSH5-217ENST00000494458 TANC2Q9HCD6 1990 aa5.63□□□□□ -1.51
MSH5-217ENST00000494458 RAI1Q7Z5J4 1906 aaPredicted RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 DYSFO75923 2080 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 DIDO1Q9BTC0 2240 aaKnown RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 IGHV3OR15-7A0A075B7D8 119 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 TRAV39A0A0B4J263 110 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 PIGBOS1A0A0B4J2F0 54 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 IGHV1-69-2A0A0G2JMI3 117 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 C3orf85A0A1B0GTC6 90 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 KBTBD11-OT1A0A1B0GTJ5 212 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 FAM172BPA6NC97 362 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 A6NNC1 897 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 H0Y980 276 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 C19orf84I3L1E1 186 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 OVOL3O00110 214 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 GOSR2O14653 212 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 GPR37O15354 613 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 IGHV2-70P01814 119 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 OR5AC1P0C628 307 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 SLC25A6P12236 298 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 IRF2P14316 349 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 RPA2P15927 270 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 VAMP1P23763 118 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 COL8A2P25067 703 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 F2RP25116 425 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 CD80P33681 288 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 CEACAM6P40199 344 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 GABRA2P47869 451 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 LUMP51884 338 aaPredicted RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 BRWD1-AS2P59051 145 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 GMFBP60983 142 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 FGL1Q08830 312 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 MORN2Q502X0 79 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 LIN54Q6MZP7 749 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 LGI3Q8N145 548 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 TCTEX1D1Q8N7M0 179 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 C8orf31Q8N9H6 132 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 ASCC1Q8N9N2 400 aaKnown RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 ZNF439Q8NDP4 499 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 LHFPL5Q8TAF8 219 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 MRGPRDQ8TDS7 321 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 NEU4Q8WWR8 484 aaPredicted RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 OR10C1Q96KK4 312 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 C2orf50Q96LR7 162 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 TP53RKQ96S44 253 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 SLC5A7Q9GZV3 580 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 PARP12Q9H0J9 701 aaKnown RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 PLSCR3Q9NRY6 295 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 CLN8Q9UBY8 286 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 JPT1Q9UK76 154 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 UBE2J1Q9Y385 318 aaPredicted RBP5.62□□□□□ -1.51
MSH5-217ENST00000494458 TMED3Q9Y3Q3 217 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 LINC00312Q9Y6C7 94 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 CACNA1DQ01668 2161 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 CACNA1BQ00975 2339 aa5.62□□□□□ -1.51
MSH5-217ENST00000494458 A0A087X0M5 115 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 A0A1B0GW55 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 A0A1B0GX30 115 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ZNF729A6NN14 1252 aaPredicted RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 MPTX1A8MV57 137 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 KIAA1324LA8MWY0 1029 aaPredicted RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms