RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 HES4Q9HCC6 221 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 DAPK2Q9UIK4 370 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 LINC00527Q9UJ94 153 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 IKZF2Q9UKS7 526 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 U3KQK5 164 aa4.05□□□□□ -1.76
PTCD3-219ENST00000494323 STAB2Q8WWQ8 2551 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 IGKV1-27A0A075B6S5 117 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 A0A1B0GTI1 187 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 A0A1W2PPI3 338 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 hADV38S2A0JD32 116 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 ARRDC5A6NEK1 342 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 ACOD1A6NK06 481 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 SLC33A1O00400 549 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 DLGAP1O14490 977 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 PRAF2O60831 178 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 DHRS3O75911 302 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 IGLV3-1P01715 115 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 IGHV3-7P01780 117 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 TTRP02766 147 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 HMGN1P05114 100 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 ATP6V1B2P21281 511 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 GABRR1P24046 479 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 MAGEA2P43356 314 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 HOXA1P49639 335 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 SNU13P55769 128 aaKnown RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 RAB25P57735 213 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 MS4A2Q01362 244 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 MEF2CQ06413 473 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 APOFQ13790 326 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 RBM39Q14498 530 aaKnown RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 UBE2V2Q15819 145 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 GRK1Q15835 563 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 MINOS1Q5TGZ0 78 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 PRAMEF5Q5TYX0 476 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 TMEM42Q69YG0 159 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 DEGS2Q6QHC5 323 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 BTNL8Q6UX41 500 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 UNQ9370/PRO34162Q6UXP9 181 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 SLC25A26Q70HW3 274 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 PIGWQ7Z7B1 504 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 TRAPPC6BQ86SZ2 158 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF679Q8IYX0 411 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 HS3ST5Q8IZT8 346 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 OR4X2Q8NGF9 303 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 OR4P4Q8NGL7 312 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 CCDC107Q8WV48 283 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 CAPSLQ8WWF8 208 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 BSCL2Q96G97 398 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 NOL4LQ96MY1 436 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 RBM14Q96PK6 669 aaKnown RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 CLEC7AQ9BXN2 247 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 YIPF3Q9GZM5 350 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 MED4Q9NPJ6 270 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 TVP23BQ9NYZ1 205 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 ACTR3BQ9P1U1 418 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 DPM3Q9P2X0 92 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 NUFIP1Q9UHK0 495 aaKnown RBP4.04□□□□□ -1.76
PTCD3-219ENST00000494323 COPS3Q9UNS2 423 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 POLDIP2Q9Y2S7 368 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 MINOS1-NBL1R4GNA1 71 aa4.04□□□□□ -1.76
PTCD3-219ENST00000494323 TRAV24A0A0B4J272 114 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 PSMB11A5LHX3 300 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 LEUTXA8MZ59 168 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 SIRPB1O00241 398 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 GNGT2O14610 69 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 TOR1AO14656 332 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF254O75437 659 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 SRSF10O75494 262 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 OR2F2O95006 317 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 RPP14O95059 124 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 HAND1O96004 215 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 CST1P01037 141 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 RBP4P02753 201 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 SLC2A5P22732 501 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 CDK2P24941 298 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 OR3A4PP47883 348 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 GLIPR1P48060 266 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 NPBWR2P48146 333 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 RIDAP52758 137 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 CXCR4P61073 352 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 RPL23AP62750 156 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 CDK5Q00535 292 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 BDH1Q02338 343 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 AESQ08117 197 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 IL24Q13007 206 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 IL18R1Q13478 541 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF829Q3KNS6 432 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 SLC35D3Q5M8T2 416 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 BCL2L15Q5TBC7 163 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ZNF322Q6U7Q0 402 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 DHFR2Q86XF0 187 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ELMOD2Q8IZ81 293 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 RDH10Q8IZV5 341 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 OSR2Q8N2R0 312 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 EMG1Q92979 244 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 AKR1E2Q96JD6 320 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 CEP19Q96LK0 163 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 ATP6V0BQ99437 205 aa4.03□□□□□ -1.76
PTCD3-219ENST00000494323 MCRIP2Q9BUT9 160 aaKnown RBP4.03□□□□□ -1.76
PTCD3-219ENST00000494323 PKIBQ9C010 78 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms