RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SLC23A1Q9UHI7 598 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 JPT1Q9UK76 154 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 MTORP42345 2549 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 SULT1C2O00338 296 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 NPFFO15130 113 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 RGS11O94810 467 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 FCER2P06734 321 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 GSTT2P0CG29 244 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 GSTT2BP0CG30 244 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 EPHA1P21709 976 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 CD34P28906 385 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 GNG10P50151 68 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 PRRX1P54821 245 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 LOXL3P58215 753 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 ARPC4P59998 168 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 MRPS10P82664 201 aaKnown RBP11.87□□□□□ -0.51
BRCA1-223ENST00000494123 SPANXN2Q5MJ10 180 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 HOGA1Q86XE5 327 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 GVQW1Q8N7I0 195 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 BEST4Q8NFU0 473 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 OR11H6Q8NGC7 330 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 OR52L2PQ8NGH6 319 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 OR9G1Q8NH87 305 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 PTTG2Q9NZH5 202 aa11.87□□□□□ -0.51
BRCA1-223ENST00000494123 BET1O15155 118 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 CRLF1O75462 422 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 ZBTB25P24278 435 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 PPP1CCP36873 323 aaKnown RBP11.86□□□□□ -0.51
BRCA1-223ENST00000494123 MIDNQ504T8 468 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 ZNF626Q68DY1 528 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 ZNF596Q8TC21 504 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 FCAMRQ8WWV6 532 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 ZNF69Q9UC07 566 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 ANXA10Q9UJ72 324 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 IGKV1D-8A0A087WSZ0 117 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 SAA4P35542 130 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 GNMTQ14749 295 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 IGSF11Q5DX21 431 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 FAM53AQ6NSI3 398 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-223ENST00000494123 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 C22orf15Q8WYQ4 148 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 GINS4Q9BRT9 223 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
BRCA1-223ENST00000494123 NAV3Q8IVL0 2385 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 J3QR06 171 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 YPEL1O60688 119 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 CTXN2P0C2S0 81 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 CEACAM6P40199 344 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 ACTBP60709 375 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 ACTG1P63261 375 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 Q3ZCU0 254 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 MORN2Q502X0 79 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 UTF1Q5T230 341 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 BEND2Q8NDZ0 799 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 OR52I2Q8NH67 350 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 YPEL2Q96QA6 119 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 CABLES2Q9BTV7 478 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 MMP28Q9H239 520 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 FAM96BQ9Y3D0 163 aa11.85□□□□□ -0.51
BRCA1-223ENST00000494123 TBL2Q9Y4P3 447 aaKnown RBP11.85□□□□□ -0.51
BRCA1-223ENST00000494123 AMMECR1Q9Y4X0 333 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-223ENST00000494123 IGKV1-6A0A0C4DH72 117 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 CTDSPLO15194 276 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 RBBP9O75884 186 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 DIRAS3O95661 229 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 FAM157CP0CG43 387 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 HTR1DP28221 377 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 RCVRNP35243 200 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 DGCR2P98153 550 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 HERPUD1Q15011 391 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 HLA-DRB5Q30154 266 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 PYDC2Q56P42 97 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 CREB3L1Q96BA8 519 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 V9GYH0 126 aa11.84□□□□□ -0.51
BRCA1-223ENST00000494123 SVEP1Q4LDE5 3571 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 IGLV1-47P01700 117 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 PTBP1P26599 531 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRCA1-223ENST00000494123 OR3A3P47888 321 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 TAS2R46P59540 309 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-223ENST00000494123 C8orf31Q8N9H6 132 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 OR4P4Q8NGL7 312 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 SMIM4Q8WVI0 70 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 EDARADDQ8WWZ3 215 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 SOSTQ9BQB4 213 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms