RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 CHPT1Q8WUD6 406 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 GIMAP1Q8WWP7 306 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 MRGPRFQ96AM1 343 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 Q96MF0 132 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 FOXC2Q99958 501 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 ZNF2Q9BSG1 426 aaPredicted RBP9.38□□□□□ -0.91
MCF2L-231ENST00000494043 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 TOLLIPQ9H0E2 274 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 FXYD6Q9H0Q3 95 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 OR2S2Q9NQN1 319 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 COPZ2Q9P299 210 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 JPT1Q9UK76 154 aa9.38□□□□□ -0.91
MCF2L-231ENST00000494043 IGHV3-43A0A0B4J1X8 118 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 IGHV2-70DA0A0C4DH43 119 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 OR5H14A6NHG9 310 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 C17orf98A8MV24 154 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 MMP23AO75900 390 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 NDUFB6O95139 128 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 PPYP01298 95 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 RBP4P02753 201 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 IGHV3-43DP0DP04 118 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 AADACP22760 399 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 PPP1CCP36873 323 aaKnown RBP9.37□□□□□ -0.91
MCF2L-231ENST00000494043 CEACAM6P40199 344 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 LOXL3P58215 753 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 HERV-K104P61576 105 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 LTC4SQ16873 150 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 AADACL3Q5VUY0 350 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 FAM53AQ6NSI3 398 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-231ENST00000494043 CENPSQ8N2Z9 138 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 KIR3DL3Q8N743 410 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 OR10V1Q8NGI7 309 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 OR52M1Q8NGK5 317 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 DACT3Q96B18 629 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-231ENST00000494043 MOB3AQ96BX8 217 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 DMRTB1Q96MA1 342 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 SLC25A21Q9BQT8 299 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-231ENST00000494043 GFOD1Q9NXC2 390 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 RDH8Q9NYR8 311 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 ONECUT1Q9UBC0 465 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 GNG12Q9UBI6 72 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 POLR3KQ9Y2Y1 108 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-231ENST00000494043 NUBP2Q9Y5Y2 271 aa9.37□□□□□ -0.91
MCF2L-231ENST00000494043 FAM172BPA6NC97 362 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 M0R1W7 72 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 YPEL1O60688 119 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 TCRBP04435 133 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 NFYBP25208 207 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 ECI1P42126 302 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 LOXL1Q08397 574 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-231ENST00000494043 KIAA2026Q5HYC2 2103 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 PLET1Q6UQ28 207 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 CCBE1Q6UXH8 406 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-231ENST00000494043 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 C1orf159Q96HA4 380 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 YPEL2Q96QA6 119 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 REG4Q9BYZ8 158 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 PARP12Q9H0J9 701 aaKnown RBP9.36□□□□□ -0.91
MCF2L-231ENST00000494043 C20orf85Q9H1P6 137 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 MMP28Q9H239 520 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 NUDT15Q9NV35 164 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 OR2W1Q9Y3N9 320 aa9.36□□□□□ -0.91
MCF2L-231ENST00000494043 IGKV1D-13A0A0B4J2D9 117 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 hCG_1809904A0A1W2PP81 198 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 A0A1W2PPE2 198 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 A0A1W2PR64 198 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 A0A1W2PRV1 198 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 RGS11O94810 467 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 IGHV1-8P0DP01 117 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 IGKV1-13P0DP09 117 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 PGAM2P15259 253 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 UCP3P55916 312 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 FXYD4P59646 89 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 ERVFRD-1P60508 538 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 SURF2Q15527 256 aaPredicted RBP9.35□□□□□ -0.91
MCF2L-231ENST00000494043 MORN2Q502X0 79 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 LY6G6FQ5SQ64 297 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 UTF1Q5T230 341 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 ZDHHC22Q8N966 263 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 MARCH1Q8TCQ1 289 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 FAM216AQ8WUB2 273 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 EDARADDQ8WWZ3 215 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 TOMM40LQ969M1 308 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 CREB3L1Q96BA8 519 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 UPRTQ96BW1 309 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 LPAR2Q9HBW0 351 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 MMP26Q9NRE1 261 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 SESN1Q9Y6P5 492 aa9.35□□□□□ -0.91
MCF2L-231ENST00000494043 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 ABCA2Q9BZC7 2435 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 TRAV6A0A075B6T7 132 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 A0A087X0M5 115 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 A0A1B0GX30 115 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 ITGB1BP1O14713 200 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 ARPC1BO15143 372 aaKnown RBP9.34□□□□□ -0.91
MCF2L-231ENST00000494043 MSMBP08118 114 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 H2AFB2P0C5Z0 115 aa9.34□□□□□ -0.91
MCF2L-231ENST00000494043 LUMP51884 338 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms