RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MELTFP08582 738 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 PPP1CCP36873 323 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 LGALS4P56470 323 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 BPIFB3P59826 476 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 SRSF2Q01130 221 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 GVQW1Q8N7I0 195 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 OR10A7Q8NGE5 316 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 FAM96BQ9Y3D0 163 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 IGKV1-6A0A0C4DH72 117 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 TOR1AO14656 332 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 GSTT2P0CG29 244 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 GSTT2BP0CG30 244 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 CD34P28906 385 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 PITPNAQ00169 270 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 MIDNQ504T8 468 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 IGSF11Q5DX21 431 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 CNIH2Q6PI25 160 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 ZNF554Q86TJ5 538 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 DYNAPQ8N1N2 210 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 OR52M1Q8NGK5 317 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 OR4P4Q8NGL7 312 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 NXF2Q9GZY0 626 aaKnown RBP14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 OR1A1Q9P1Q5 309 aa14.51□□□□□ -0.09
PDLIM7-208ENST00000493815 A6NHS1 94 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 J3QR06 171 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 SLC31A2O15432 143 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 FABP7O15540 132 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 IGLV1-47P01700 117 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 DTYMKP23919 212 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 ZNF134P52741 427 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 SCGB2A2Q13296 93 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 HERPUD1Q15011 391 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 OR9G1Q8NH87 305 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 DUX5Q96PT3 197 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 RAB9BQ9NP90 201 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 SLC23A1Q9UHI7 598 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 HILPDAQ9Y5L2 63 aa14.5□□□□□ -0.09
PDLIM7-208ENST00000493815 HTD2P86397 168 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 MORN2Q502X0 79 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 PLA1AQ53H76 456 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 PRIMA1Q86XR5 153 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 PARP12Q9H0J9 701 aaKnown RBP14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 MGAT4AQ9UM21 535 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 BET1O15155 118 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 PRRX1P54821 245 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 SSX2Q16385 188 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 HLA-DRB5Q30154 266 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 RNASE12Q5GAN4 147 aaKnown RBP14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 ZNF596Q8TC21 504 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 ZDHHC16Q969W1 377 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 DIRAS2Q96HU8 199 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 MMP28Q9H239 520 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 TNFRSF19Q9NS68 423 aa14.49□□□□□ -0.09
PDLIM7-208ENST00000493815 POM121CA8CG34 1229 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 BUB1B-PAK6H3BSN5 160 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 HSPA12AO43301 675 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 HTR1DP28221 377 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 TNFSF8P32971 234 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 PRSS3P35030 304 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 KIR2DS4P43632 304 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 KIR2DS1Q14954 304 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 TUSC1Q2TAM9 212 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 CT45A1Q5HYN5 189 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 ZNF439Q8NDP4 499 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 BEND2Q8NDZ0 799 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 CT45A3Q8NHU0 189 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 ABHD1Q96SE0 405 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 OCSTAMPQ9BR26 566 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 ESM1Q9NQ30 184 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 JPT1Q9UK76 154 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 ADAM30Q9UKF2 790 aa14.48□□□□□ -0.09
PDLIM7-208ENST00000493815 FBP1P09467 338 aa14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 CEACAM6P40199 344 aa14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 DIAPH2-AS1Q14236 149 aa14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 RBMS3Q6XE24 437 aaKnown RBP14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 OR4A4PQ8NGN8 299 aa14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 OR10X1Q8NGY0 326 aa14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 ZNF418Q8TF45 676 aaPredicted RBP14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 MMP27Q9H306 513 aa14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 TBL2Q9Y4P3 447 aaKnown RBP14.47□□□□□ -0.09
PDLIM7-208ENST00000493815 ZBTB25P24278 435 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 SRSF7Q16629 238 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 TMEM30BQ3MIR4 351 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 STEAP3Q658P3 488 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 Q6ZS49 121 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 BEST4Q8NFU0 473 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 SNAPC3Q92966 411 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 DPM3Q9P2X0 92 aa14.46□□□□□ -0.09
PDLIM7-208ENST00000493815 HOXA3O43365 443 aaPredicted RBP14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 YPEL1O60688 119 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 VENTXO95231 258 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 IGHV4-59P01825 116 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 RAB13P51153 203 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 BAMBIQ13145 260 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 MINOS1Q5TGZ0 78 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 Q6YL49 198 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 SLC25A48Q6ZT89 311 aaKnown RBP14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 HOGA1Q86XE5 327 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 YPEL2Q96QA6 119 aa14.46□□□□□ -0.1
PDLIM7-208ENST00000493815 IFT46Q9NQC8 304 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms