RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 LRRC36Q1X8D7 754 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 LCN12Q6JVE5 192 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 CASTOR1Q8WTX7 329 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 TNFAIP8L1Q8WVP5 186 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 RITA1Q96K30 269 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 SIGLEC8Q9NYZ4 499 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 IL36GQ9NZH8 169 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 GNG12Q9UBI6 72 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 RNF150Q9ULK6 438 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 DHDHQ9UQ10 334 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 ST3GAL6Q9Y274 331 aa10.85□□□□□ -0.67
PRPF40A-211ENST00000493468 AIPO00170 330 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 SLC16A6O15403 523 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 FKBP6O75344 327 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 MT-ND4P03905 459 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 MPV17LQ2QL34 196 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 AKIRIN2Q53H80 203 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 ZNF529Q6P280 563 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 IL34Q6ZMJ4 242 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 Q8N402 240 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 OR9G4Q8NGQ1 327 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 OR10K1Q8NGX5 313 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 CCDC107Q8WV48 283 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 RFKQ969G6 155 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 NABP2Q9BQ15 211 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 ENOPH1Q9UHY7 261 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 ARL2BPQ9Y2Y0 163 aa10.84□□□□□ -0.67
PRPF40A-211ENST00000493468 MITFO75030 526 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 HTR3BO95264 441 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 TPPP2P59282 170 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 CX3CL1P78423 397 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 ALKBH1Q13686 389 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 KLF5Q13887 457 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 ACTBL2Q562R1 376 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 HSP90B2PQ58FF3 399 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 C6orf183Q5T699 404 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 LPCAT4Q643R3 524 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 TRAT1Q6PIZ9 186 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 OR10V1Q8NGI7 309 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 OR52N1Q8NH53 320 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 PELI1Q96FA3 418 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 GPER1Q99527 375 aa10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-211ENST00000493468 J3QRE1 110 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 GEMIN2O14893 280 aaKnown RBP10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 MAGEB3O15480 346 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 HBZP02008 142 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 RAB3AP20336 220 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 CD40LGP29965 261 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 KDM4DQ6B0I6 523 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 ZNF833PQ6ZTB9 187 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 LAX1Q8IWV1 398 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 ODF3L1Q8IXM7 274 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 GAPTQ8N292 157 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 STX19Q8N4C7 294 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 OR8J1Q8NGP2 316 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 OR2K2Q8NGT1 345 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 ABHD14AQ9BUJ0 271 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 FAM192AQ9GZU8 254 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 MED4Q9NPJ6 270 aa10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 CNOT2Q9NZN8 540 aaKnown RBP10.82□□□□□ -0.68
PRPF40A-211ENST00000493468 RRHO14718 337 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 TFAP2AP05549 437 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 MORN2Q502X0 79 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 SYT6Q5T7P8 510 aaPredicted RBP10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 UNQ5815/PRO19632Q6UWF5 114 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 NEK7Q8TDX7 302 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 NSL1Q96IY1 281 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 ST6GALNAC5Q9BVH7 336 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 JAM3Q9BX67 310 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 METTL9Q9H1A3 318 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 RIBC2Q9H4K1 309 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 SPACA1Q9HBV2 294 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 ZNF446Q9NWS9 450 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 RCC2Q9P258 522 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 GMPPBQ9Y5P6 360 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 A3GALT2U3KPV4 340 aa10.81□□□□□ -0.68
PRPF40A-211ENST00000493468 TCRBV3S1A0A5B6 114 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 DAPL1A0PJW8 107 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 NUPR2A6NF83 97 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 TMEM212A6NML5 194 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 H3BUA1 57 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 TRGV3P03979 118 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 LY6G6FQ5SQ64 297 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 ATAD3CQ5T2N8 411 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 FAM71F2Q6NXP2 309 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 OR51A2Q8NGJ7 313 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 OR1L1Q8NH94 360 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 ABHD5Q8WTS1 349 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 MS4A10Q96PG2 267 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 GABARAPL1Q9H0R8 117 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 FBXL15Q9H469 300 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 PAK1IP1Q9NWT1 392 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-211ENST00000493468 FAM53CQ9NYF3 392 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms