RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 FAM106CPP0CH98 169 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
EPHB4-209ENST00000492878 VEGFCP49767 419 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 INSL3P51460 131 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 FABP5Q01469 135 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 SSX1Q16384 188 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 ZNF260Q3ZCT1 412 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 PRAMEF5Q5TYX0 476 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 OR52W1Q6IF63 320 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 TEX38Q6PEX7 206 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 HEPN1Q6WQI6 88 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 SPARTQ8N0X7 666 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 STPG2Q8N412 459 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 CREB3L1Q96BA8 519 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 BANF2Q9H503 90 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 GHRLQ9UBU3 117 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 LINC00527Q9UJ94 153 aa11.9□□□□□ -0.5
EPHB4-209ENST00000492878 MEIKINA0A087WXM9 373 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
EPHB4-209ENST00000492878 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
EPHB4-209ENST00000492878 UBBP0CG47 229 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 MGMTP16455 207 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 CDK2P24941 298 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 CEACAM3P40198 252 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 GLP1RP43220 463 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 PAX5Q02548 391 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 HLA-DRB5Q30154 266 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 RSBN1Q5VWQ0 802 aaPredicted RBP11.89□□□□□ -0.51
EPHB4-209ENST00000492878 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 LCNL1Q6ZST4 164 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 TMEM104Q8NE00 496 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 PLPPR1Q8TBJ4 325 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 ISOC1Q96CN7 298 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 SELENOIQ9C0D9 397 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 CST11Q9H112 138 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 ZNF286AQ9HBT8 521 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 SPACA1Q9HBV2 294 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 KIF25Q9UIL4 384 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
EPHB4-209ENST00000492878 A0A087X0M5 115 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 A0A1B0GX30 115 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 CALRP27797 417 aaKnown RBP11.88□□□□□ -0.51
EPHB4-209ENST00000492878 GDNFP39905 211 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 UBE2UQ5VVX9 321 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 ZNF565Q8N9K5 539 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 OR13A1Q8NGR1 328 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 FCGR1BQ92637 280 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
EPHB4-209ENST00000492878 KBTBD11-OT1A0A1B0GTJ5 212 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 TMEM30CPA0ZSE6 113 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 SLC22A1O15245 554 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 CD37P11049 281 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 PSMB9P28065 219 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 HTR2CP28335 458 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 MNDAP41218 407 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 FOXE3Q13461 319 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 PNLIPRP3Q17RR3 467 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 C17orf58Q2M2W7 97 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 ZNF773Q6PK81 442 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 SLC35E3Q7Z769 313 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 OR6M1Q8NGM8 313 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 MRGPRDQ8TDS7 321 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 Q96M66 194 aa11.87□□□□□ -0.51
EPHB4-209ENST00000492878 RCC2Q9P258 522 aaKnown RBP11.87□□□□□ -0.51
EPHB4-209ENST00000492878 AK6Q9Y3D8 172 aaKnown RBP11.87□□□□□ -0.51
EPHB4-209ENST00000492878 KIAA2026Q5HYC2 2103 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 JTBO76095 146 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 LY86O95711 162 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 CGB3P0DN86 165 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 CGB7P0DN87 165 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 RBM39Q14498 530 aaKnown RBP11.86□□□□□ -0.51
EPHB4-209ENST00000492878 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 UTF1Q5T230 341 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 FOXRED2Q8IWF2 684 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 C4orf3Q8WVX3 66 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 GFI1Q99684 422 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 PLGRKTQ9HBL7 147 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 CALYQ9NYX4 217 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 PEX16Q9Y5Y5 336 aa11.86□□□□□ -0.51
EPHB4-209ENST00000492878 TRAV39A0A0B4J263 110 aa11.85□□□□□ -0.51
EPHB4-209ENST00000492878 TRDV1A0A1B0GX56 115 aa11.85□□□□□ -0.51
EPHB4-209ENST00000492878 FAM172BPA6NC97 362 aa11.85□□□□□ -0.51
EPHB4-209ENST00000492878 SLC17A2O00624 439 aa11.85□□□□□ -0.51
EPHB4-209ENST00000492878 BPNT1O95861 308 aa11.85□□□□□ -0.51
EPHB4-209ENST00000492878 IL1AP01583 271 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms