RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 MPPED1O15442 326 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 OR2T1O43869 369 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 FAM20BO75063 409 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 DHRS3O75911 302 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 ZFAND5O76080 213 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 LGALS2P05162 132 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 OR5AC1P0C628 307 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 NHLRC4P0CG21 123 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 PGA4P0DJD7 388 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 PGA3P0DJD8 388 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 PGA5P0DJD9 388 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 FGF6P10767 208 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 FGF3P11487 239 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 GP1BBP13224 206 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 ATF1P18846 271 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 KLK2P20151 261 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 KIR2DS2P43631 304 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 RARRES1P49788 294 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 FOXA1P55317 472 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 B3GALT5-AS1P59052 145 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SNRPD2P62316 118 aaKnown RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SRPXP78539 464 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 HGFACQ04756 655 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SLC38A11Q08AI6 406 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM267Q0VDI3 215 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 AWAT1Q58HT5 328 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 RNASE12Q5GAN4 147 aaKnown RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 FAM201AQ5SY85 155 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 Q5XG85 94 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 KCTD18Q6PI47 426 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF730Q6ZMV8 503 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM150AQ86TG1 271 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 GBGT1Q8N5D6 347 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 OR2T33Q8NG76 320 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 OR4C3Q8NH37 302 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 THAP6Q8TBB0 222 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 ZNRF4Q8WWF5 429 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 LRRC61Q9BV99 259 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SAMD10Q9BYL1 202 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SCAND2PQ9GZW5 306 aaPredicted RBP3.46□□□□□ -1.85
BRCA1-220ENST00000492859 CHST6Q9GZX3 395 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SLC25A31Q9H0C2 315 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 OR51E2Q9H255 320 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 JPT2Q9H910 190 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 TNFRSF12AQ9NP84 129 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 SERTAD4Q9NUC0 356 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 NUDT4Q9NZJ9 180 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 UBIAD1Q9Y5Z9 338 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 PARP14Q460N5 1801 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 DOCK6Q96HP0 2047 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MYOM2P54296 1465 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MAGI2Q86UL8 1455 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 TRAV26-2A0A0B4J265 109 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 A0A1B0GV50 99 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 A0A1W2PRS3 328 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 DHRS12A0PJE2 317 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF724A8MTY0 619 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF705EA8MWA4 302 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 H7BYZ3 331 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 J3QR89 54 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 RRHO14718 337 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 PGLYRP1O75594 196 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 C1QL1O75973 258 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 NDUFC2O95298 119 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 GPANK1O95872 356 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 P01737 135 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 IGHMP01871 453 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MRPL3P09001 348 aaKnown RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 OR4A8P0C604 315 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 OR12D1P0DN82 309 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 IGFBP6P24592 240 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 PTGDSP41222 190 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 LIM2P55344 173 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 CTBP2P56545 445 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 UBE2NP61088 152 aaKnown RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 SLC35A1P78382 337 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 PRDX1Q06830 199 aaKnown RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 DHRS2Q13268 280 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 KHDC3LQ587J8 217 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 LRRC10Q5BKY1 277 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ALG10BQ5I7T1 473 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 C10orf91Q5T1B1 145 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF626Q68DY1 528 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ZNF705AQ6ZN79 300 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 FOXI2Q6ZQN5 318 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MOB1BQ7L9L4 216 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 SFTPA1Q8IWL2 248 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 HIST3H2BBQ8N257 126 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 RBMXL3Q8N7X1 1067 aaKnown RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 YIPF7Q8N8F6 280 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ZFP41Q8N8Y5 198 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 OR8B12Q8NGG6 310 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 MZB1Q8WU39 189 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM106AQ96A25 262 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 TMEM18Q96B42 140 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 SLAMF6Q96DU3 332 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 ADAT3Q96EY9 351 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 CARD19Q96LW7 228 aa3.46□□□□□ -1.86
BRCA1-220ENST00000492859 KCTD14Q9BQ13 255 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-220ENST00000492859 C1QTNF6Q9BXI9 259 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms