RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 C9J4A7 227 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 SMLR1H3BR10 107 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 DENRO43583 198 aaKnown RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 UGT2B11O75310 529 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 NPPAP01160 153 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 CTSEP14091 401 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 NQO1P15559 274 aaKnown RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 PSMD8P48556 350 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 DLX6P56179 175 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 PMS2P3Q13401 168 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 ZNHIT3Q15649 155 aaPredicted RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 TMEM176BQ3YBM2 270 aaPredicted RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 TRMT12Q53H54 448 aaKnown RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 MTERF4Q7Z6M4 381 aaKnown RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 BOD1L2Q8IYS8 172 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 OR5K1Q8NHB7 308 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.72□□□□□ -2.13
CLK1-213ENST00000492793 LRRC45Q96CN5 670 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 C11orf49Q9H6J7 331 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 MS4A12Q9NXJ0 267 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 DNAJC12Q9UKB3 198 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.72□□□□□ -2.13
CLK1-213ENST00000492793 FIS1Q9Y3D6 152 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 ZNF337Q9Y3M9 751 aa1.72□□□□□ -2.13
CLK1-213ENST00000492793 SAMHD1Q9Y3Z3 626 aaKnown RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 BRD4O60885 1362 aaPredicted RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 LRPPRCP42704 1394 aaKnown RBP1.72□□□□□ -2.13
CLK1-213ENST00000492793 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 VPS37CA5D8V6 355 aaPredicted RBP1.71□□□□□ -2.14
CLK1-213ENST00000492793 DEDDO75618 318 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 ATP6V1G2O95670 118 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 F8A1P23610 371 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 C1QTNF8P60827 252 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 SLC35A2P78381 396 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 C1DQ13901 141 aaKnown RBP1.71□□□□□ -2.14
CLK1-213ENST00000492793 ZBTB6Q15916 424 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 VN1R4Q7Z5H5 301 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 OR5AK3PQ8NH89 298 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 SUN5Q8TC36 379 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 TAMM41Q96BW9 452 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 SMIM12Q96EX1 92 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 CAPZA3Q96KX2 299 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 HBEGFQ99075 208 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 ACBD6Q9BR61 282 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 TMEM208Q9BTX3 173 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 UGT2B28Q9BY64 529 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 GTSF1LQ9H1H1 148 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 GLS2Q9UI32 602 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 OR51B4Q9Y5P0 310 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 ALG5Q9Y673 324 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 KMT2EQ8IZD2 1858 aa1.71□□□□□ -2.14
CLK1-213ENST00000492793 DSCAML1Q8TD84 2053 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 F5H5K5 113 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 F8VZ95 297 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 J3QLI3 93 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 M0QYV0 167 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 TRAPPC3O43617 180 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 PET100P0DJ07 73 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 P0DMU3 169 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 FAM231AP0DMU4 169 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 FAM231CP0DMU5 169 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 FUSP35637 526 aaKnown RBP eCLIP1.7□□□□□ -2.14
CLK1-213ENST00000492793 PSMB3P49720 205 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 FAM3AP98173 230 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 HTR4Q13639 388 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 PDGFRLQ15198 375 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 PTPRKQ15262 1439 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 SDIM1Q6ZPB5 146 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 YIPF7Q8N8F6 280 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 OR10A6Q8NH74 314 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 ERMNQ8TAM6 284 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 CD200R1Q8TD46 325 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 MGLLQ99685 303 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 BBS2Q9BXC9 721 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 OR52A5Q9H2C5 316 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 C1orf109Q9NX04 203 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 LINC00527Q9UJ94 153 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 ITGB4P16144 1822 aa1.7□□□□□ -2.14
CLK1-213ENST00000492793 DAPL1A0PJW8 107 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 H3BSA7 217 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 STK16O75716 305 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 ARL6IP5O75915 188 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 GRPRP30550 384 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 AGTR1P30556 359 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 LPAR6P43657 344 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 STC1P52823 247 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 FOXF1Q12946 379 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 EXOC3L4Q17RC7 722 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 DNAL1Q4LDG9 190 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 ZFAND2AQ8N6M9 145 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 NATD1Q8N6N6 113 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 TMEM75Q8N9X5 138 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 OR4C16Q8NGL9 310 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 ANGPTL6Q8NI99 470 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 ATP6V1G3Q96LB4 118 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 METTL9Q9H1A3 318 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 CD300AQ9UGN4 299 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 SNX10Q9Y5X0 201 aa1.69□□□□□ -2.14
CLK1-213ENST00000492793 ARHGAP32A7KAX9 2087 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms