RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 MMACHCQ9Y4U1 282 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TRIP11Q15643 1979 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
VTA1-204ENST00000491881 ZANQ9Y493 2812 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TGP01266 2768 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 KDM6AO15550 1401 aaPredicted RBP1.74□□□□□ -2.13
VTA1-204ENST00000491881 PTPN23Q9H3S7 1636 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 HIVEP3Q5T1R4 2406 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 RAB19A4D1S5 217 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 A6NED7 52 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 A8MWP4 228 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 hCG_2039718K7EN88 272 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 NDUFS8O00217 210 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 FFAR1O14842 300 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 CCDC172P0C7W6 258 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 M6PRP20645 277 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 S100A2P29034 98 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 LGALS7P47929 136 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 VSNL1P62760 191 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 C2orf80Q0P641 193 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 GOLGA7BQ2TAP0 167 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 HBMQ6B0K9 141 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 GLYATQ6IB77 296 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 SSX6Q7RTT6 188 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 OR2M3Q8NG83 312 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 LRRC20Q8TCA0 184 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 PHOSPHO2Q8TCD6 241 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 CASTOR1Q8WTX7 329 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
VTA1-204ENST00000491881 OR5P3Q8WZ94 311 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 APOBEC3DQ96AK3 386 aaPredicted RBP1.74□□□□□ -2.13
VTA1-204ENST00000491881 PYURFQ96I23 114 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 ZNF396Q96N95 335 aaPredicted RBP1.74□□□□□ -2.13
VTA1-204ENST00000491881 LINC01587Q99440 93 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 RMND1Q9NWS8 449 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 PRRC2CQ9Y520 2896 aaKnown RBP1.74□□□□□ -2.13
VTA1-204ENST00000491881 ATMQ13315 3056 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 TLN2Q9Y4G6 2542 aa1.74□□□□□ -2.13
VTA1-204ENST00000491881 COL5A3P25940 1745 aaPredicted RBP1.74□□□□□ -2.13
VTA1-204ENST00000491881 KIAA1671Q9BY89 1806 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 THADAQ6YHU6 1953 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 TRAV8-3A0A0A6YYJ7 113 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 A0A1B0GXF2 115 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 PGPA6NDG6 321 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 SDHAF1A6NFY7 115 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 H3BMM0 161 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 M0QXV9 152 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 SLC31A1O15431 190 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 CDS2O95674 445 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 GCLMP48507 274 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 FAM19A1Q7Z5A9 133 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 SPICQ8N5J4 248 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 TRIML2Q8N7C3 387 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 OR4K17Q8NGC6 315 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 UBE2WQ96B02 151 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 ZMYND19Q96E35 227 aaPredicted RBP1.73□□□□□ -2.13
VTA1-204ENST00000491881 BIRC8Q96P09 236 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 OLFM3Q96PB7 478 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 PITX2Q99697 317 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 ZNF443Q9Y2A4 671 aaPredicted RBP1.73□□□□□ -2.13
VTA1-204ENST00000491881 RBMX2Q9Y388 322 aaKnown RBP1.73□□□□□ -2.13
VTA1-204ENST00000491881 FADS3Q9Y5Q0 445 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 EP300Q09472 2414 aaPredicted RBP1.73□□□□□ -2.13
VTA1-204ENST00000491881 KNDC1Q76NI1 1749 aa1.73□□□□□ -2.13
VTA1-204ENST00000491881 AKAP13Q12802 2813 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 TOP2AP11388 1531 aaKnown RBP1.72□□□□□ -2.13
VTA1-204ENST00000491881 DUOX2Q9NRD8 1548 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 SBF1O95248 1867 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 TMEM131Q92545 1883 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 NUP153P49790 1475 aaKnown RBP1.72□□□□□ -2.13
VTA1-204ENST00000491881 PLEKHH2Q8IVE3 1493 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 ZMPSTE24O75844 475 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 GPR75O95800 540 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 PDYNP01213 254 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 CTSGP08311 255 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 SLC2A1P11166 492 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 CNTFRP26992 372 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 TSPAN5P62079 268 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 TNNC1P63316 161 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 XIAPP98170 497 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 DHRS2Q13268 280 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 TRIP13Q15645 432 aaPredicted RBP1.72□□□□□ -2.13
VTA1-204ENST00000491881 TNXAQ16473 311 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 LAIR2Q6ISS4 152 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 LYPD6Q86Y78 171 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 RBM45Q8IUH3 476 aaKnown RBP1.72□□□□□ -2.13
VTA1-204ENST00000491881 ST13P4Q8IZP2 240 aaPredicted RBP1.72□□□□□ -2.13
VTA1-204ENST00000491881 TMBIM4Q9HC24 238 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 U3KQK5 164 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 SVILO95425 2214 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 NOS1P29475 1434 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 KIAA1107Q9UPP5 1409 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 ADAMTSL1Q8N6G6 1762 aa1.72□□□□□ -2.13
VTA1-204ENST00000491881 QRICH2Q9H0J4 1663 aa1.71□□□□□ -2.14
VTA1-204ENST00000491881 F8P00451 2351 aa1.71□□□□□ -2.14
VTA1-204ENST00000491881 LAMA1P25391 3075 aa1.71□□□□□ -2.14
VTA1-204ENST00000491881 CHD2O14647 1828 aaKnown RBP1.71□□□□□ -2.14
VTA1-204ENST00000491881 SBF2Q86WG5 1849 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms