RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 AMMECR1Q9Y4X0 333 aaPredicted RBP12.87□□□□□ -0.35
TRA2A-208ENST00000490942 LEUTXA8MZ59 168 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 CLDN34H7C241 214 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 J3QR06 171 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 SULT1C2O00338 296 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 FABP7O15540 132 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 HLA-DQB1P01920 261 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 CTXN2P0C2S0 81 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 ZBTB25P24278 435 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 CEACAM3P40198 252 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 DLX1P56177 255 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 RIPPLY3P57055 190 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 HILS1P60008 231 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 RUSC1-AS1Q66K80 236 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 PDZD9Q8IXQ8 264 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
TRA2A-208ENST00000490942 SLC6A7Q99884 636 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 CABLES2Q9BTV7 478 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 MEGF9Q9H1U4 602 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 MMP28Q9H239 520 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 GHITMQ9H3K2 345 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 DPM3Q9P2X0 92 aa12.86□□□□□ -0.35
TRA2A-208ENST00000490942 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 A6NHS1 94 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 FAM25AB3EWG3 89 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 FAM25CB3EWG5 89 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 FAM25GB3EWG6 89 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 CTDSP2O14595 271 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 RGS5O15539 181 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 SSX5O60225 188 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 PRSS3P35030 304 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 MORN2Q502X0 79 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 Q6YL49 198 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 PRR18Q8N4B5 295 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 ZNF439Q8NDP4 499 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 NUDCD2Q8WVJ2 157 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 AJUBAQ96IF1 538 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 MIXL1Q9H2W2 232 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 EXTL2Q9UBQ6 330 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 POMT1Q9Y6A1 747 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 JMJD1CQ15652 2540 aa12.85□□□□□ -0.35
TRA2A-208ENST00000490942 TCF21O43680 179 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 SCTP09683 121 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 DYNLT3P51808 116 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 ZNF137PP52743 207 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 MRPS10P82664 201 aaKnown RBP12.84□□□□□ -0.35
TRA2A-208ENST00000490942 PRB3Q04118 309 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-208ENST00000490942 DEFB112Q30KQ8 113 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 SLC25A48Q6ZT89 311 aaKnown RBP12.84□□□□□ -0.35
TRA2A-208ENST00000490942 HOGA1Q86XE5 327 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 LAX1Q8IWV1 398 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 EDARADDQ8WWZ3 215 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 C22orf15Q8WYQ4 148 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 ZNF48Q96MX3 618 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-208ENST00000490942 DCUN1D5Q9BTE7 237 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-208ENST00000490942 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 ZNRD1Q9P1U0 126 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 ELF5Q9UKW6 265 aaPredicted RBP12.84□□□□□ -0.35
TRA2A-208ENST00000490942 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
TRA2A-208ENST00000490942 TRBV6-7A0A0A0MS04 114 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 LY6LH3BQJ8 138 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 LPLP06858 475 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 IL3RAP26951 378 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 RAB7AP51149 207 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 ARHGDIBP52566 201 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 MADCAM1Q13477 382 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 LTC4SQ16873 150 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 FOXB2Q5VYV0 432 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 CNIH2Q6PI25 160 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 SIGLECL1Q8N7X8 197 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 OR5R1Q8NH85 324 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 GPX8Q8TED1 209 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 IL1F10Q8WWZ1 152 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
TRA2A-208ENST00000490942 ANXA10Q9UJ72 324 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 NIPBLQ6KC79 2804 aaeCLIP12.83□□□□□ -0.36
TRA2A-208ENST00000490942 MXRA5Q9NR99 2828 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 C2CD3Q4AC94 2353 aa12.83□□□□□ -0.36
TRA2A-208ENST00000490942 IGKV1-6A0A0C4DH72 117 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 HSPA12AO43301 675 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 TXNL1O43396 289 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 GSTT2P0CG29 244 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 GSTT2BP0CG30 244 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 NAT1P18440 290 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 S100A5P33763 92 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 HERPUD1Q15011 391 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 IZUMO1Q8IYV9 350 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 BEST4Q8NFU0 473 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 OR2AK2Q8NG84 335 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 OR52L2PQ8NGH6 319 aa12.82□□□□□ -0.36
TRA2A-208ENST00000490942 OR10X1Q8NGY0 326 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 682.6 ms