RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 ASCL2Q99929 193 aa12.95□□□□□ -0.34
SRGAP3-209ENST00000490889 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
SRGAP3-209ENST00000490889 S100A14Q9HCY8 104 aa12.95□□□□□ -0.34
SRGAP3-209ENST00000490889 ETAA1Q9NY74 926 aa12.95□□□□□ -0.34
SRGAP3-209ENST00000490889 MRPS28Q9Y2Q9 187 aaKnown RBP12.95□□□□□ -0.34
SRGAP3-209ENST00000490889 A0A1W2PPK0 400 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 SPINT2O43291 252 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 CNTFRP26992 372 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 Q499Y3 187 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 LYPD6Q86Y78 171 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 PQLC1Q8N2U9 271 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF485Q8NCK3 441 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 OR11H1Q8NG94 326 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 BANF2Q9H503 90 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 GNB4Q9HAV0 340 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 SPACA1Q9HBV2 294 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF107Q9UII5 783 aaPredicted RBP12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF580Q9UK33 172 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 SACSQ9NZJ4 4579 aa12.94□□□□□ -0.34
SRGAP3-209ENST00000490889 TRBV5-7A0A0A0MS05 114 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 G3V318 75 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 LANCL1O43813 399 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 SC5DO75845 299 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 FSTP19883 344 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 DOC2BQ14184 412 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 MMDQ15546 238 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF260Q3ZCT1 412 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 C6orf183Q5T699 404 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 SIGIRRQ6IA17 410 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 ODF3L1Q8IXM7 274 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 OR52L2PQ8NGH6 319 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 RDH12Q96NR8 316 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 OR14A2Q96R54 314 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 TAF9BQ9HBM6 251 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 PEX16Q9Y5Y5 336 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 WSB1Q9Y6I7 421 aa12.93□□□□□ -0.34
SRGAP3-209ENST00000490889 I3L521 148 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 ATP6V0E1O15342 81 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 GPR176Q14439 515 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 TMEM30BQ3MIR4 351 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 MORN2Q502X0 79 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 YIF1BQ5BJH7 314 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 AWAT2Q6E213 333 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 JAGN1Q8N5M9 183 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 SELENOIQ9C0D9 397 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 OR2S2Q9NQN1 319 aa12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 MBNL3Q9NUK0 354 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 SMPD3Q9NY59 655 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
SRGAP3-209ENST00000490889 IGHV7-81A0A0B4J1V7 117 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 UBE2QL1A1L167 161 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 MAS1P04201 325 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 MGMTP16455 207 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 MYL12AP19105 171 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 PPP1CCP36873 323 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 ACTBP60709 375 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 GNB1P62873 340 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 STEAP3Q658P3 488 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF491Q8N8L2 437 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 MRPL30Q8TCC3 161 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 Q96M66 194 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 NABP2Q9BQ15 211 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 CKLFQ9UBR5 152 aa12.91□□□□□ -0.34
SRGAP3-209ENST00000490889 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 IGLV1-40P01703 118 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 OR5H8P0DN80 308 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 TRAT1Q6PIZ9 186 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 ZNF555Q8NEP9 628 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 OR1N2Q8NGR9 330 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 TMEM80Q96HE8 168 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 UBE2E2Q96LR5 201 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 ABHD14AQ9BUJ0 271 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 ANKRD60Q9BZ19 345 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 OR51J1Q9H342 316 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 PARP11Q9NR21 331 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 DNAH7Q8WXX0 4024 aa12.9□□□□□ -0.34
SRGAP3-209ENST00000490889 RYR2Q92736 4967 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 CRTAPO75718 401 aaPredicted RBP12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 HLA-DRB1P01911 266 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 FUT3P21217 361 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 OR3A3P47888 321 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 NDPQ00604 133 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 RUNX1Q01196 453 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 C6orf141Q5SZD1 244 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 GGHQ92820 318 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms