RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	RAB6A	P20340	208 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	ZNF134	P52741	427 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	AANAT	Q16613	207 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	ZNF880	Q6PDB4	577 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	TRAT1	Q6PIZ9	186 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	ZNF439	Q8NDP4	499 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	OR52M1	Q8NGK5	317 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	OR13F1	Q8NGS4	319 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	RPE	Q96AT9	228 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	RAB3C	Q96E17	227 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	OR2S2	Q9NQN1	319 aa		14.92	□□□□□ -0.02
C4A-256	ENST00000490663	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	14.92	□□□□□ -0.02
C4A-256	ENST00000490663		A0A1W2PPI3	338 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	MFNG	O00587	321 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	PLXNB1	O43157	2135 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	NDUFA7	O95182	113 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	CEACAM3	P40198	252 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	VBP1	P61758	197 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	HLA-DRB3	P79483	266 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	TIMM50	Q3ZCQ8	353 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	IZUMO1	Q8IYV9	350 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	OR4F5	Q8NH21	305 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	OR56B4	Q8NH76	319 aa		14.91	□□□□□ -0.02
C4A-256	ENST00000490663	PARP12	Q9H0J9	701 aa	Known RBP	14.91	□□□□□ -0.02
C4A-256	ENST00000490663	IGHV3-72	A0A0B4J1Y9	119 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	HSD17B6	O14756	317 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	TIMM23	O14925	209 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	CD3G	P09693	182 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	HIST1H1D	P16402	221 aa	Known RBP	14.9	□□□□□ -0.02
C4A-256	ENST00000490663	RPS19	P39019	145 aa	Known RBP	14.9	□□□□□ -0.02
C4A-256	ENST00000490663	SERPINB10	P48595	397 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	MADCAM1	Q13477	382 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	HABP2	Q14520	560 aa	Predicted RBP	14.9	□□□□□ -0.02
C4A-256	ENST00000490663	CT45A1	Q5HYN5	189 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	HIST2H2BD	Q6DRA6	164 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	SLC16A12	Q6ZSM3	486 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	DRAM1	Q8N682	238 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	CT45A3	Q8NHU0	189 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	LINC01006	Q8NI28	216 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	SLC25A38	Q96DW6	304 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	MRPS26	Q9BYN8	205 aa	Known RBP	14.9	□□□□□ -0.02
C4A-256	ENST00000490663	C12orf4	Q9NQ89	552 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	OR1A1	Q9P1Q5	309 aa		14.9	□□□□□ -0.02
C4A-256	ENST00000490663	ZNF230	Q9UIE0	474 aa	Predicted RBP	14.9	□□□□□ -0.02
C4A-256	ENST00000490663	SH2D7	A6NKC9	451 aa	Predicted RBP	14.89	□□□□□ -0.03
C4A-256	ENST00000490663	HAX1	O00165	279 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	SCT	P09683	121 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	KRTAP10-3	P60369	221 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	MORN2	Q502X0	79 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663		Q6ZS46	218 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	DTX3	Q8N9I9	347 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	CAPSL	Q8WWF8	208 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663		Q9N2K0	584 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	RHBDL2	Q9NX52	303 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	ABRACL	Q9P1F3	81 aa		14.89	□□□□□ -0.03
C4A-256	ENST00000490663	METTL21EP	A6NDL7	271 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	SNRNP70	P08621	437 aa	Known RBP	14.88	□□□□□ -0.03
C4A-256	ENST00000490663	RANBP1	P43487	201 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	DYNLT3	P51808	116 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	RPL15	P61313	204 aa	Known RBP	14.88	□□□□□ -0.03
C4A-256	ENST00000490663	ARFRP1	Q13795	201 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	GPR107	Q5VW38	600 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	SLC25A48	Q6ZT89	311 aa	Known RBP	14.88	□□□□□ -0.03
C4A-256	ENST00000490663	MOB1B	Q7L9L4	216 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	LYG1	Q8N1E2	194 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	LINC00311	Q8N616	119 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	CFHR4	Q92496	578 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	CREB3L1	Q96BA8	519 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	GALM	Q96C23	342 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	BEX1	Q9HBH7	125 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	RAB9B	Q9NP90	201 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	JPT1	Q9UK76	154 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	RNF114	Q9Y508	228 aa		14.88	□□□□□ -0.03
C4A-256	ENST00000490663	TRBV6-6	A0A0A6YYG2	114 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	IGKV1-6	A0A0C4DH72	117 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	CLPSL1	A2RUU4	121 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	TMEM235	A6NFC5	223 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	ST8SIA5	O15466	376 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	FCGR3A	P08637	254 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	BRS3	P32247	399 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	MNDA	P41218	407 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	TMEM95	Q3KNT9	176 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	MOB3B	Q86TA1	216 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	OR4C13	Q8NGP0	309 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	NUDCD2	Q8WVJ2	157 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	WFDC12	Q8WWY7	111 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	PTX4	Q96A99	478 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	OCSTAMP	Q9BR26	566 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	SLC25A33	Q9BSK2	321 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	ABHD14A	Q9BUJ0	271 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	SLC23A1	Q9UHI7	598 aa		14.87	□□□□□ -0.03
C4A-256	ENST00000490663	IGHV1-3	A0A0C4DH29	117 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	TFAP2A	P05549	437 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	OR3A3	P47888	321 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	ALDH3B2	P48448	385 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	MRPS15	P82914	257 aa	Known RBP	14.86	□□□□□ -0.03
C4A-256	ENST00000490663	HTD2	P86397	168 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	HES1	Q14469	280 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	HNF4G	Q14541	408 aa		14.86	□□□□□ -0.03
C4A-256	ENST00000490663	HERPUD1	Q15011	391 aa		14.86	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms