RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 BAIAP2L2Q6UXY1 529 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 CENPVQ7Z7K6 275 aaPredicted RBP8.31□□□□□ -1.08
TTC28-207ENST00000490475 DYNAPQ8N1N2 210 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 GDPD1Q8N9F7 314 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 ZNF565Q8N9K5 539 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 OR4X2Q8NGF9 303 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 WIPF2Q8TF74 440 aaPredicted RBP8.31□□□□□ -1.08
TTC28-207ENST00000490475 NCOR1P1Q9H4R4 102 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 KIF25Q9UIL4 384 aa8.31□□□□□ -1.08
TTC28-207ENST00000490475 AMMECR1Q9Y4X0 333 aaPredicted RBP8.31□□□□□ -1.08
TTC28-207ENST00000490475 ZNF729A6NN14 1252 aaPredicted RBP8.3□□□□□ -1.08
TTC28-207ENST00000490475 OR2F2O95006 317 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 MPIG6BO95866 241 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CGB3P0DN86 165 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CGB7P0DN87 165 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 PF4V1P10720 104 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CD28P10747 220 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CDK2P24941 298 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 GDNFP39905 211 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CLDN12P56749 244 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 QRFPP83859 136 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CD83Q01151 205 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 MPV17LQ2QL34 196 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 UTF1Q5T230 341 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 PRAMEF5Q5TYX0 476 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 RSBN1Q5VWQ0 802 aaPredicted RBP8.3□□□□□ -1.08
TTC28-207ENST00000490475 SIGIRRQ6IA17 410 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 LINC00596Q86U02 117 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 WFDC9Q8NEX5 89 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 OR5AU1Q8NGC0 362 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 OR4P4Q8NGL7 312 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 OR13A1Q8NGR1 328 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 RFESDQ8TAC1 157 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 MRAPQ8TCY5 172 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CCDC107Q8WV48 283 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 MRPS24Q96EL2 167 aaKnown RBP8.3□□□□□ -1.08
TTC28-207ENST00000490475 Q96M66 194 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CITED2Q99967 270 aaPredicted RBP8.3□□□□□ -1.08
TTC28-207ENST00000490475 MMP28Q9H239 520 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 OR51E2Q9H255 320 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 GHRLQ9UBU3 117 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 SSR3Q9UNL2 185 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 TSSC4Q9Y5U2 329 aaPredicted RBP8.3□□□□□ -1.08
TTC28-207ENST00000490475 V9GY05 133 aa8.3□□□□□ -1.08
TTC28-207ENST00000490475 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 A0A087X0M5 115 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 TRAV1-2A0A0B4J238 106 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 A0A1B0GX30 115 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 UBE2QL1A1L167 161 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 MCRIP1C9JLW8 97 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 SLC17A2O00624 439 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 BPNT1O95861 308 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 IGLV1-47P01700 117 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 PF4P02776 101 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 MT-ND4P03905 459 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 UBBP0CG47 229 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 FAM106CPP0CH98 169 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 ARSBP15848 533 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 FUT3P21217 361 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 SLC6A1P30531 599 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 KCNJ3P48549 501 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 OR10A3P58181 314 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 BLCAPP62952 87 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 RPS27AP62979 156 aaKnown RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 UNC119Q13432 240 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 ASAH1Q13510 395 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 HABP2Q14520 560 aaPredicted RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 RAB11BQ15907 218 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 C2orf76Q3KRA6 126 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 LDLRAD2Q5SZI1 272 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 HES5Q5TA89 166 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 RAB12Q6IQ22 244 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 OR51D1Q8NGF3 324 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 OR6M1Q8NGM8 313 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 KCNG3Q8TAE7 436 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 MRGPRDQ8TDS7 321 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 NEK7Q8TDX7 302 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 ZNF486Q96H40 463 aaPredicted RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 RCC1LQ96I51 464 aaKnown RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 RBM14Q96PK6 669 aaKnown RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 OCSTAMPQ9BR26 566 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 CHCHD6Q9BRQ6 235 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 NICN1Q9BSH3 213 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 CENPOQ9BU64 300 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 CST11Q9H112 138 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 RNF167Q9H6Y7 350 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 TXNL4BQ9NX01 149 aaKnown RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 ZMAT5Q9UDW3 170 aaKnown RBP8.29□□□□□ -1.08
TTC28-207ENST00000490475 ZNF221Q9UK13 617 aa8.29□□□□□ -1.08
TTC28-207ENST00000490475 PRKDCP78527 4128 aaKnown RBP8.28□□□□□ -1.08
TTC28-207ENST00000490475 LOC100506127A0A0U1RQW1 187 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 KBTBD11-OT1A0A1B0GTJ5 212 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 TCRBV4S1A1TA0A5B7 111 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 SMIM30A4D0T7 59 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 HMX3A6NHT5 357 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 TMEM14DPA8MWL7 114 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 FAM25AB3EWG3 89 aa8.28□□□□□ -1.08
TTC28-207ENST00000490475 FAM25CB3EWG5 89 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms