RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FAM25EA8MYX2 175 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 OVOL1O14753 267 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 BRI3O95415 125 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 P0DMU3 169 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 FAM231AP0DMU4 169 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 FAM231CP0DMU5 169 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 NQO1P15559 274 aaKnown RBP1.52□□□□□ -2.17
CD46-216ENST00000490278 SULT1A2P50226 295 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 KRTAP12-1P59990 96 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 RAB8AP61006 207 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 DEFB103AP81534 67 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 FAM3AP98173 230 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 PDK2Q15119 407 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 YIPF7Q8N8F6 280 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 ERMNQ8TAM6 284 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 DYNC2LI1Q8TCX1 351 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 CCDC12Q8WUD4 166 aaPredicted RBP1.52□□□□□ -2.17
CD46-216ENST00000490278 TMEM56Q96MV1 263 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 GTSF1LQ9H1H1 148 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 OR52A5Q9H2C5 316 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 PSORS1C2Q9UIG4 136 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 FBXL3Q9UKT7 428 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 FIS1Q9Y3D6 152 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 ITGB4P16144 1822 aa1.52□□□□□ -2.17
CD46-216ENST00000490278 DNMT1P26358 1616 aaKnown RBP1.51□□□□□ -2.17
CD46-216ENST00000490278 F5H5K5 113 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 SYNGR1O43759 233 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 MPZL2O60487 215 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 IGKV1-16P04430 117 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 IFI30P13284 250 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 PDGFRLQ15198 375 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 FAM229BQ4G0N7 80 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 TIMM23BQ5SRD1 257 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 DOLPP1Q86YN1 238 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 RNASEH2CQ8TDP1 164 aaKnown RBP1.51□□□□□ -2.17
CD46-216ENST00000490278 TAMM41Q96BW9 452 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 ASCL3Q9NQ33 180 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 MYO5BQ9ULV0 1848 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 MYO9BQ13459 2157 aa1.51□□□□□ -2.17
CD46-216ENST00000490278 PTPRJQ12913 1337 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 A0A0J9YX75 114 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 KNCNA6PVL3 124 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 LY6LH3BQJ8 138 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 LIN7AO14910 233 aaPredicted RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 IGHV3-30-3P0DP02 117 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 ZNF7P17097 686 aaPredicted RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 KDELR2P33947 212 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 PPP1CCP36873 323 aaKnown RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 GABRA4P48169 554 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 PSMB3P49720 205 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 PSMD7P51665 324 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 DLX6P56179 175 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 ZNF117Q03924 483 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 ANGPT1Q15389 498 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 EXOC3L4Q17RC7 722 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 TRMT12Q53H54 448 aaKnown RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 SLC13A5Q86YT5 568 aaPredicted RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 SYCE1Q8N0S2 351 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 ACBD6Q9BR61 282 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 MED10Q9BTT4 135 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 MED18Q9BUE0 208 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 C1QTNF6Q9BXI9 259 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 SLC19A3Q9BZV2 496 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 SMDT1Q9H4I9 107 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 FBN1P35555 2871 aaKnown RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 CACNA1GO43497 2377 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 VWDEQ8N2E2 1590 aa1.5□□□□□ -2.17
CD46-216ENST00000490278 NUP153P49790 1475 aaKnown RBP1.5□□□□□ -2.17
CD46-216ENST00000490278 COL5A3P25940 1745 aaPredicted RBP1.49□□□□□ -2.17
CD46-216ENST00000490278 C9J4A7 227 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 M0QYV0 167 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 TRAPPC3O43617 180 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 ZNF189O75820 626 aaPredicted RBP1.49□□□□□ -2.17
CD46-216ENST00000490278 ORM2P19652 201 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 PVALBP20472 110 aaPredicted RBP1.49□□□□□ -2.17
CD46-216ENST00000490278 LPAR6P43657 344 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 STC1P52823 247 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 RWDD2BP57060 319 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 SLC35A2P78381 396 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 MRPL51Q4U2R6 128 aaKnown RBP1.49□□□□□ -2.17
CD46-216ENST00000490278 PCOTHQ58A44 107 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 CCDC121Q6ZUS5 278 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 SELENOHQ8IZQ5 122 aaKnown RBP1.49□□□□□ -2.17
CD46-216ENST00000490278 ATP6V1C2Q8NEY4 427 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 OR5AK3PQ8NH89 298 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 DNAJC30Q96LL9 226 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 TXNDC17Q9BRA2 123 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 UPK3BQ9BT76 320 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 LINC00527Q9UJ94 153 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 ALG5Q9Y673 324 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 MINOS1-NBL1R4GNA1 71 aa1.49□□□□□ -2.17
CD46-216ENST00000490278 CACNA1SQ13698 1873 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 CLUHO75153 1309 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 HSBP1L1C9JCN9 74 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 MKRN2OSH3BPM6 223 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 S1PR2O95136 353 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 SOD1P00441 154 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 ASS1P00966 412 aaKnown RBP1.48□□□□□ -2.17
CD46-216ENST00000490278 CD99P14209 185 aa1.48□□□□□ -2.17
CD46-216ENST00000490278 ZNF140P52738 457 aaPredicted RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms