RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 AADACP22760 399 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 KIR2DL5AQ8N109 375 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 BBS1Q8NFJ9 593 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 OR10V1Q8NGI7 309 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 KIR2DL5BQ8NHK3 375 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 CNIH3Q8TBE1 160 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 RARRES2Q99969 163 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
UFD1-209ENST00000489406 SAMD4AQ9UPU9 718 aaKnown RBP11.05□□□□□ -0.64
UFD1-209ENST00000489406 SNX5Q9Y5X3 404 aa11.05□□□□□ -0.64
UFD1-209ENST00000489406 H3BUA1 57 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 MAGEA2P43356 314 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 MAGOHP61326 146 aaKnown RBP11.04□□□□□ -0.64
UFD1-209ENST00000489406 RPS16P62249 146 aaKnown RBP11.04□□□□□ -0.64
UFD1-209ENST00000489406 TNP2Q05952 138 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 ANKRD55Q3KP44 614 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 Q3ZCU0 254 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 PVRIGQ6DKI7 326 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 STON2Q8WXE9 905 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 ASB17Q8WXJ9 295 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 CACNG8Q8WXS5 425 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 NEK6Q9HC98 313 aa11.04□□□□□ -0.64
UFD1-209ENST00000489406 BMPR1BO00238 502 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 ATF1P18846 271 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 PRKACBP22694 351 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 PAX5Q02548 391 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 C1orf134Q5TEV5 83 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 GLYATQ6IB77 296 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 ARPINQ7Z6K5 226 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 ZDHHC13Q8IUH4 622 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 AQP11Q8NBQ7 271 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 CCDC107Q8WV48 283 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 ANP32BQ92688 251 aaKnown RBP11.03□□□□□ -0.64
UFD1-209ENST00000489406 CCDC140Q96MF4 163 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 KCTD14Q9BQ13 255 aaPredicted RBP11.03□□□□□ -0.64
UFD1-209ENST00000489406 GNG12Q9UBI6 72 aa11.03□□□□□ -0.64
UFD1-209ENST00000489406 CA2P00918 260 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 SEMG1P04279 462 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 SLC35D3Q5M8T2 416 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 ZNF57Q68EA5 555 aaPredicted RBP11.02□□□□□ -0.65
UFD1-209ENST00000489406 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 KCTD20Q7Z5Y7 419 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 NR2C2APQ86WQ0 139 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 GRPEL2Q8TAA5 225 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 PP6455Q8WZ26 134 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 PYURFQ96I23 114 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 OPALINQ96PE5 141 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 ADI1Q9BV57 179 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 RHOFQ9HBH0 211 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 UBQLN2Q9UHD9 624 aa11.02□□□□□ -0.65
UFD1-209ENST00000489406 RPP14O95059 124 aaKnown RBP11.01□□□□□ -0.65
UFD1-209ENST00000489406 FABP3P05413 133 aa11.01□□□□□ -0.65
UFD1-209ENST00000489406 MAPRE2Q15555 327 aa11.01□□□□□ -0.65
UFD1-209ENST00000489406 METTL21CQ5VZV1 264 aa11.01□□□□□ -0.65
UFD1-209ENST00000489406 ZNF322Q6U7Q0 402 aaPredicted RBP11.01□□□□□ -0.65
UFD1-209ENST00000489406 TEX47Q8TBZ9 253 aa11.01□□□□□ -0.65
UFD1-209ENST00000489406 MCUR1Q96AQ8 359 aa11.01□□□□□ -0.65
UFD1-209ENST00000489406 ADAT3Q96EY9 351 aaPredicted RBP11.01□□□□□ -0.65
UFD1-209ENST00000489406 TMEM14AQ9Y6G1 99 aa11.01□□□□□ -0.65
UFD1-209ENST00000489406 HMCN2Q8NDA2 5059 aa11□□□□□ -0.65
UFD1-209ENST00000489406 A0A0G2JND7 137 aa11□□□□□ -0.65
UFD1-209ENST00000489406 J3QL48 77 aa11□□□□□ -0.65
UFD1-209ENST00000489406 LGALS9O00182 355 aa11□□□□□ -0.65
UFD1-209ENST00000489406 TNFRSF11BO00300 401 aa11□□□□□ -0.65
UFD1-209ENST00000489406 ORC5O43913 435 aa11□□□□□ -0.65
UFD1-209ENST00000489406 RBMXL2O75526 392 aaKnown RBP11□□□□□ -0.65
UFD1-209ENST00000489406 CCNB2O95067 398 aa11□□□□□ -0.65
UFD1-209ENST00000489406 OCM2P0CE71 109 aa11□□□□□ -0.65
UFD1-209ENST00000489406 OCMP0CE72 109 aaPredicted RBP11□□□□□ -0.65
UFD1-209ENST00000489406 SLC2A5P22732 501 aa11□□□□□ -0.65
UFD1-209ENST00000489406 CBLN1P23435 193 aa11□□□□□ -0.65
UFD1-209ENST00000489406 KCNJ3P48549 501 aa11□□□□□ -0.65
UFD1-209ENST00000489406 PPP1R8Q12972 351 aaKnown RBP11□□□□□ -0.65
UFD1-209ENST00000489406 MICAQ29983 383 aa11□□□□□ -0.65
UFD1-209ENST00000489406 Q6ZRM9 215 aa11□□□□□ -0.65
UFD1-209ENST00000489406 OR11H2Q8NH07 326 aa11□□□□□ -0.65
UFD1-209ENST00000489406 USMG5Q96IX5 58 aa11□□□□□ -0.65
UFD1-209ENST00000489406 MAP6D1Q9H9H5 199 aa11□□□□□ -0.65
UFD1-209ENST00000489406 MLXQ9UH92 298 aa11□□□□□ -0.65
UFD1-209ENST00000489406 FAT1Q14517 4588 aa11□□□□□ -0.65
UFD1-209ENST00000489406 TMEM30CPA0ZSE6 113 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 H3BN98 237 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 IFNA10P01566 189 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 OR3A3P47888 321 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 HMGA2P52926 109 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 CXCR4P61073 352 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 ACTR3P61158 418 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 FAM131AQ6UXB0 335 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 CROCCP2Q86T23 111 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 ODF3L1Q8IXM7 274 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 SAXO1Q8IYX7 474 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 OR1L6Q8NGR2 347 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 THRSPQ92748 146 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 RNF126Q9BV68 326 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 DPCDQ9BVM2 203 aaPredicted RBP10.99□□□□□ -0.65
UFD1-209ENST00000489406 ZNF581Q9P0T4 197 aa10.99□□□□□ -0.65
UFD1-209ENST00000489406 METTL1Q9UBP6 276 aaKnown RBP10.99□□□□□ -0.65
UFD1-209ENST00000489406 TRAV10A0A0B4J240 114 aa10.98□□□□□ -0.65
UFD1-209ENST00000489406 KRT36O76013 467 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms