RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 DCKP27707 260 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 ADARB1P78563 741 aaKnown RBP9.65□□□□□ -0.86
CPSF3-204ENST00000489403 KIAA0141Q14154 515 aaPredicted RBP9.65□□□□□ -0.86
CPSF3-204ENST00000489403 GPR176Q14439 515 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 MMDQ15546 238 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 C6orf183Q5T699 404 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 TMPRSS11AQ6ZMR5 421 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 MUL1Q969V5 352 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 KLK15Q9H2R5 256 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 RAB9BQ9NP90 201 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 BABAM2Q9NXR7 383 aa9.65□□□□□ -0.86
CPSF3-204ENST00000489403 MRPS28Q9Y2Q9 187 aaKnown RBP9.65□□□□□ -0.86
CPSF3-204ENST00000489403 G3V318 75 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 ATP6V0E1O15342 81 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 GPX5O75715 221 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 SC5DO75845 299 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 OR8U8P0C7N1 319 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 CNTFRP26992 372 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 CHATP28329 748 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 RPS11P62280 158 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPSF3-204ENST00000489403 GNB1P62873 340 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 GNMTQ14749 295 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 Q499Y3 187 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 MORN2Q502X0 79 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 DMKNQ6E0U4 476 aaPredicted RBP9.64□□□□□ -0.87
CPSF3-204ENST00000489403 RAB12Q6IQ22 244 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 GLIPR1L1Q6UWM5 242 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 C5orf24Q7Z6I8 188 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 ODF3L1Q8IXM7 274 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 JAGN1Q8N5M9 183 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 ZFP41Q8N8Y5 198 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 GHSRQ92847 366 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 MRPS24Q96EL2 167 aaKnown RBP9.64□□□□□ -0.87
CPSF3-204ENST00000489403 PGLYRP3Q96LB9 341 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 UBE2E2Q96LR5 201 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 CHCHD6Q9BRQ6 235 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 BANF2Q9H503 90 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 MBNL3Q9NUK0 354 aaKnown RBP9.64□□□□□ -0.87
CPSF3-204ENST00000489403 CLEC2DQ9UHP7 191 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 PEX16Q9Y5Y5 336 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 WSB1Q9Y6I7 421 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 RYR2Q92736 4967 aa9.64□□□□□ -0.87
CPSF3-204ENST00000489403 IGHV7-81A0A0B4J1V7 117 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 LY86O95711 162 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 INSL3P51460 131 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 ACTBP60709 375 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 RUNX1Q01196 453 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF616Q08AN1 781 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 YIF1BQ5BJH7 314 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 STEAP3Q658P3 488 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 AWAT2Q6E213 333 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 TMEM65Q6PI78 240 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 OR1N2Q8NGR9 330 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 RITA1Q96K30 269 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 RDH12Q96NR8 316 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 OR5B12Q96R08 314 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 ABHD14AQ9BUJ0 271 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 MRPL20Q9BYC9 149 aaKnown RBP9.63□□□□□ -0.87
CPSF3-204ENST00000489403 TAF9BQ9HBM6 251 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 OR2S2Q9NQN1 319 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 CKLFQ9UBR5 152 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 DIMT1Q9UNQ2 313 aaKnown RBP9.63□□□□□ -0.87
CPSF3-204ENST00000489403 VSIG4Q9Y279 399 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 EXOSC1Q9Y3B2 195 aaKnown RBP9.63□□□□□ -0.87
CPSF3-204ENST00000489403 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
CPSF3-204ENST00000489403 TRBV5-7A0A0A0MS05 114 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 A0A1W2PPK0 400 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 UBE2QL1A1L167 161 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 FAM90A10PA6NDY2 464 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 FAM90A7PA6NKC0 464 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 FAM90A23PA8MXZ1 464 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 CA11O75493 328 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 HLA-DRB1P01911 266 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 MGMTP16455 207 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 MYL12AP19105 171 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 PPP1CCP36873 323 aaKnown RBP9.62□□□□□ -0.87
CPSF3-204ENST00000489403 SIGIRRQ6IA17 410 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 LYPD6Q86Y78 171 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 PQLC1Q8N2U9 271 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF485Q8NCK3 441 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF555Q8NEP9 628 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 OR52L2PQ8NGH6 319 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 DCUN1D4Q92564 292 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 Q96M66 194 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 OR14A2Q96R54 314 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 NABP2Q9BQ15 211 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 ZNF251Q9BRH9 671 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 ANKRD60Q9BZ19 345 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 SELENOIQ9C0D9 397 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 OR51J1Q9H342 316 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 S100A14Q9HCY8 104 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 ISYNA1Q9NPH2 558 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 PARP11Q9NR21 331 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 JPT1Q9UK76 154 aa9.62□□□□□ -0.87
CPSF3-204ENST00000489403 TRAV41A0A0B4J266 112 aa9.61□□□□□ -0.87
CPSF3-204ENST00000489403 IRGMA1A4Y4 181 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms