RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 TLX1NBP0CAT3 122 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 HIST1H1EP10412 219 aaKnown RBP3.17□□□□□ -1.9
CCL20-204ENST00000489160 GADD45AP24522 165 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 SLC6A1P30531 599 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 SERPINB1P30740 379 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 SULT1A1P50225 295 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 CCL7P80098 99 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 SRSF6Q13247 344 aaKnown RBP3.17□□□□□ -1.9
CCL20-204ENST00000489160 SKP2Q13309 424 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 UBE2SQ16763 222 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 CENPWQ5EE01 88 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 SAXO2Q658L1 398 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 Q6P435 159 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 TIFABQ6ZNK6 161 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 NT5DC3Q86UY8 548 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 ORMDL3Q8N138 153 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 SLC25A45Q8N413 288 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 OR10G2Q8NGC3 310 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 OR5H2Q8NGV7 314 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 AP3S1Q92572 193 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 TMBIM1Q969X1 311 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 CLDN23Q96B33 292 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 FXYD5Q96DB9 178 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 DGCR14Q96DF8 476 aaKnown RBP3.17□□□□□ -1.9
CCL20-204ENST00000489160 OLFM3Q96PB7 478 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 BCL2L14Q9BZR8 327 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 C8orf17Q9NRJ1 99 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 TAS2R5Q9NYW4 299 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 TAC3Q9UHF0 121 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 GINS2Q9Y248 185 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 BTRCQ9Y297 605 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 POLR1DQ9Y2S0 133 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 ARL2BPQ9Y2Y0 163 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 TMEM14AQ9Y6G1 99 aa3.17□□□□□ -1.9
CCL20-204ENST00000489160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.17□□□□□ -1.9
CCL20-204ENST00000489160 MTCL1Q9Y4B5 1905 aaKnown RBP3.17□□□□□ -1.9
CCL20-204ENST00000489160 MTUS2Q5JR59 1369 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 MAP3K1Q13233 1512 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 IGHV3-49A0A0A0MS15 119 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 TMEM223A0PJW6 202 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 MIF4GDA9UHW6 222 aaKnown RBP3.16□□□□□ -1.9
CCL20-204ENST00000489160 K7EPK0 472 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 LGALS9O00182 355 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 MFNGO00587 321 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ZNF806P0C7X5 589 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 IL1RNP18510 177 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 CCR7P32248 378 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 OR4D2P58180 307 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 TAS2R43P59537 309 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ESRRGP62508 458 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ATP5G2Q06055 141 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 SMCO1Q147U7 214 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 LRRC26Q2I0M4 334 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 NAA40Q86UY6 237 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 LINC00337Q8N6G1 96 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 OR11L1Q8NGX0 322 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 OR5K1Q8NHB7 308 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 TAMM41Q96BW9 452 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 IMP4Q96G21 291 aaKnown RBP3.16□□□□□ -1.9
CCL20-204ENST00000489160 RNF157Q96PX1 679 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 DOK1Q99704 481 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 EBNA1BP2Q99848 306 aaKnown RBP3.16□□□□□ -1.9
CCL20-204ENST00000489160 ZNF649Q9BS31 505 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 NDFIP1Q9BT67 221 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ZNF436Q9C0F3 470 aaPredicted RBP3.16□□□□□ -1.9
CCL20-204ENST00000489160 FAM107BQ9H098 131 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ARMC1Q9NVT9 282 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 CMTM6Q9NX76 183 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 TMEM216Q9P0N5 145 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 DKKL1Q9UK85 242 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 RAB26Q9ULW5 256 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ZNF337Q9Y3M9 751 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
CCL20-204ENST00000489160 TRAPPC8Q9Y2L5 1435 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 DIP2AQ14689 1571 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 NWD1Q149M9 1564 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 REREQ9P2R6 1566 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 SHANK3Q9BYB0 1731 aa3.16□□□□□ -1.9
CCL20-204ENST00000489160 DEPDC5O75140 1603 aa3.15□□□□□ -1.9
CCL20-204ENST00000489160 EIF3AQ14152 1382 aaKnown RBP3.15□□□□□ -1.9
CCL20-204ENST00000489160 UGGT2Q9NYU1 1516 aa3.15□□□□□ -1.9
CCL20-204ENST00000489160 GPATCH8Q9UKJ3 1502 aaKnown RBP3.15□□□□□ -1.9
CCL20-204ENST00000489160 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.15□□□□□ -1.91
CCL20-204ENST00000489160 IGHV3-72A0A0B4J1Y9 119 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 TEX50A0A1B0GTY4 177 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 VPS37CA5D8V6 355 aaPredicted RBP3.15□□□□□ -1.91
CCL20-204ENST00000489160 A8MWL6 223 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 C8orf87E5RJ46 101 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 COPEO14579 308 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 SOCS1O15524 211 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 KCNK2O95069 426 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 CXorf1O96002 111 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 OR4A8P0C604 315 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 TGFBR2P37173 567 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 PMELP40967 661 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 ZNF83P51522 516 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 MP68P56378 58 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 H2BFSP57053 126 aa3.15□□□□□ -1.91
CCL20-204ENST00000489160 RAB2AP61019 212 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms