RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 KCNIP1Q9NZI2 227 aa10.98□□□□□ -0.65
SPTLC1-207ENST00000488921 TCRBV4S1A1TA0A5B7 111 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 UBE2QL1A1L167 161 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 SH2D7A6NKC9 451 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 TRIM64CA6NLI5 447 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 G3V4G9 280 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 UCHL1P09936 223 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 CPEP16870 476 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 SRMP19623 302 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 PSMA1P25786 263 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 HTR2CP28335 458 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 ZNF137PP52743 207 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 EBI3Q14213 229 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 INSL4Q14641 139 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 KHDC1LQ5JSQ8 128 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 C1orf100Q5SVJ3 147 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 KPRPQ5T749 579 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 FAM27D1Q5T7N8 215 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 SLC25A48Q6ZT89 311 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 CEACAM19Q7Z692 300 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 LRRTM1Q86UE6 522 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 TGIF2LXQ8IUE1 241 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 KCNG3Q8TAE7 436 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 CHPT1Q8WUD6 406 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 RTN4IP1Q8WWV3 396 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 NEDD4LQ96PU5 975 aa10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-207ENST00000488921 A0A1W2PRX2 142 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 PSMB11A5LHX3 300 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 ARL6IP5O75915 188 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 PF4P02776 101 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 SMIM18P0DKX4 95 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 RCC1P18754 421 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 CD1BP29016 333 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 RANBP1P43487 201 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 REG1BP48304 166 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 RPS27AP62979 156 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 HNF4GQ14541 408 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 NKAPLQ5M9Q1 402 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 STEAP3Q658P3 488 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 SIGIRRQ6IA17 410 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 REC114Q7Z4M0 266 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 SLC35E3Q7Z769 313 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 FOXRED2Q8IWF2 684 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 ZNF439Q8NDP4 499 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 OR6M1Q8NGM8 313 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 ST6GALNAC6Q969X2 333 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 TAF9BQ9HBM6 251 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 JPT1Q9UK76 154 aa10.96□□□□□ -0.65
SPTLC1-207ENST00000488921 SERPINE3A8MV23 424 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 SLC22A1O15245 554 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 RGS11O94810 467 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 BPNT1O95861 308 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 IGHG2P01859 326 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 CD33P20138 364 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 CHATP28329 748 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 GP2P55259 537 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 SLC35B1P78383 322 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 HTD2P86397 168 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 GPR141Q7Z602 305 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 OR8H1Q8NGG4 311 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 OR10V1Q8NGI7 309 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 OR1L1Q8NH94 360 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 MRPL30Q8TCC3 161 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 TMEM203Q969S6 136 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 TM2D1Q9BX74 207 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 OR2S2Q9NQN1 319 aa10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 LIN7CQ9NUP9 197 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-207ENST00000488921 IGHV3-72A0A0B4J1Y9 119 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 NCBP2LA6PVI3 153 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 SLC31A2O15432 143 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 MOSP00540 346 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 CD36P16671 472 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 TIMM50Q3ZCQ8 353 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 TCTEX1D4Q5JR98 221 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 COMMD1Q8N668 190 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 Q8N6K4 173 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 GALMQ96C23 342 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 URM1Q9BTM9 101 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 GON7Q9BXV9 100 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 PLGRKTQ9HBL7 147 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 NDUFB11Q9NX14 153 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 ABRACLQ9P1F3 81 aa10.94□□□□□ -0.66
SPTLC1-207ENST00000488921 TMEM14DPA8MWL7 114 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 AP4M1O00189 453 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 SLC17A2O00624 439 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 LANCL1O43813 399 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 TFAP2AP05549 437 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 CD37P11049 281 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 SLC6A1P30531 599 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 UNC119Q13432 240 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 MORN2Q502X0 79 aa10.93□□□□□ -0.66
SPTLC1-207ENST00000488921 CT45A1Q5HYN5 189 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms