RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 MUC21A0A0G2JKD1 596 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 LOC100506127A0A0U1RQW1 187 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 MUC21A0A140T8X8 626 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 A0A1B0GX12 115 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 SIGLEC16A6NMB1 481 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 F8VP50 259 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 BOLA2-SMG1P6H3BVE0 249 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 TRAPPC3O43617 180 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 SOD1P00441 154 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 SYT1P21579 422 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 UGT2B10P36537 528 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 RWDD2BP57060 319 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 ZNF117Q03924 483 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 Q3ZCU0 254 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 N4BP2L1Q5TBK1 243 aaPredicted RBP1.03□□□□□ -2.24
PTPN4-212ENST00000488896 MUC15Q8N387 334 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 OR5D18Q8NGL1 313 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 ANGPTL6Q8NI99 470 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 ERMNQ8TAM6 284 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 TMEM239Q8WW34 195 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 GTF2H4Q92759 462 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 MSANTD3Q96H12 275 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 CFAP53Q96M91 514 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 OR52B2Q96RD2 323 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 C1QTNF6Q9BXI9 259 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 C11orf49Q9H6J7 331 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 METTL8Q9H825 291 aaKnown RBP1.03□□□□□ -2.24
PTPN4-212ENST00000488896 SCML1Q9UN30 329 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 PTPRKQ15262 1439 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 ADAMTSL1Q8N6G6 1762 aa1.03□□□□□ -2.24
PTPN4-212ENST00000488896 A0A0G2JQZ4 141 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 B4DEV8 164 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 CDK14O94921 469 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 TNFAIP8O95379 198 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 SNAP29O95721 258 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 APOA1P02647 267 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 OR4A8P0C604 315 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 CTSEP14091 401 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 NQO1P15559 274 aaKnown RBP1.02□□□□□ -2.25
PTPN4-212ENST00000488896 PSMA1P25786 263 aaKnown RBP1.02□□□□□ -2.25
PTPN4-212ENST00000488896 GABARAPL2P60520 117 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 PSG3Q16557 428 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 HENMT1Q5T8I9 393 aaKnown RBP1.02□□□□□ -2.25
PTPN4-212ENST00000488896 MRPL52Q86TS9 123 aaKnown RBP1.02□□□□□ -2.25
PTPN4-212ENST00000488896 DOLPP1Q86YN1 238 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 SYCE1Q8N0S2 351 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 DTD1Q8TEA8 209 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 GALMQ96C23 342 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 EBNA1BP2Q99848 306 aaKnown RBP1.02□□□□□ -2.25
PTPN4-212ENST00000488896 RAB3GAP2Q9H2M9 1393 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 SMDT1Q9H4I9 107 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 DMAC2Q9NW81 257 aa1.02□□□□□ -2.25
PTPN4-212ENST00000488896 NYNRINQ9P2P1 1898 aaKnown RBP1.02□□□□□ -2.25
PTPN4-212ENST00000488896 PTPRJQ12913 1337 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 GOLGA8QA0A0J9YX86 632 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 GPR171O14626 319 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 CRXO43186 299 aaPredicted RBP1.01□□□□□ -2.25
PTPN4-212ENST00000488896 SGCEO43556 437 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 LDOC1O95751 146 aaPredicted RBP1.01□□□□□ -2.25
PTPN4-212ENST00000488896 IGHV3-30-3P0DP02 117 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 LYNX1P0DP58 116 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 PPP1CCP36873 323 aaKnown RBP1.01□□□□□ -2.25
PTPN4-212ENST00000488896 LPAR6P43657 344 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 RAB31Q13636 194 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 PAFAH1B3Q15102 231 aaKnown RBP1.01□□□□□ -2.25
PTPN4-212ENST00000488896 CENPWQ5EE01 88 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 FBXO48Q5FWF7 155 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 VN1R4Q7Z5H5 301 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 ZBTB8OSQ8IWT0 167 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 ATP6V1C2Q8NEY4 427 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 ZNF563Q8TA94 476 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 CYTH2Q99418 400 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 UPK3BQ9BT76 320 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 SLC19A3Q9BZV2 496 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 TREM1Q9NP99 234 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 SLX4Q8IY92 1834 aa1.01□□□□□ -2.25
PTPN4-212ENST00000488896 DSCAMO60469 2012 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 H3BSA7 217 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 K7ERQ8 282 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 SULT1C2O00338 296 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 LY6HO94772 140 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 IVLP07476 585 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 FBP1P09467 338 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 ATF1P18846 271 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 ACTR1BP42025 376 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 SULT1A2P50226 295 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 PSMD7P51665 324 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 EMP2P54851 167 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 FLOT2Q14254 428 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 MRPL51Q4U2R6 128 aaKnown RBP1□□□□□ -2.25
PTPN4-212ENST00000488896 TIMM23BQ5SRD1 257 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 LGALS9CQ6DKI2 356 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 LRRC6Q86X45 466 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 DCANP1Q8TF63 244 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 C16orf78Q8WTQ4 265 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 CCDC127Q96BQ5 260 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 CCDC124Q96CT7 223 aaKnown RBP1□□□□□ -2.25
PTPN4-212ENST00000488896 NDEL1Q9GZM8 345 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 GTSF1LQ9H1H1 148 aa1□□□□□ -2.25
PTPN4-212ENST00000488896 TXNL4BQ9NX01 149 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms