RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 GALNT14Q96FL9 552 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 RMND5BQ96G75 393 aaPredicted RBP2.41□□□□□ -2.02
UBR3-211ENST00000487689 CCDC42Q96M95 316 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 ZNF488Q96MN9 340 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 KCTD7Q96MP8 289 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 RDH12Q96NR8 316 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 SMIM14Q96QK8 99 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 GPR22Q99680 433 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 SULT4A1Q9BR01 284 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 DDA1Q9BW61 102 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 ARL6Q9H0F7 186 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 DEFB127Q9H1M4 99 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 ARV1Q9H2C2 271 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 ZDHHC11Q9H8X9 412 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 DNAJC27Q9NZQ0 273 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 COMMD9Q9P000 198 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 ZNF629Q9UEG4 869 aaPredicted RBP2.41□□□□□ -2.02
UBR3-211ENST00000487689 RAB22AQ9UL26 194 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 RAB26Q9ULW5 256 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 GUCA1BQ9UMX6 200 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 ZNF257Q9Y2Q1 563 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 SLC25A15Q9Y619 301 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 DNAH7Q8WXX0 4024 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 PTPRJQ12913 1337 aa2.41□□□□□ -2.02
UBR3-211ENST00000487689 DNAH3Q8TD57 4116 aa2.4□□□□□ -2.02
UBR3-211ENST00000487689 DENND4CQ5VZ89 1909 aa2.4□□□□□ -2.02
UBR3-211ENST00000487689 A0A1W2PQL4 384 aaPredicted RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 F5H5K5 113 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 H3BQV1 296 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 CCRL2O00421 344 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 PHYHO14832 338 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 ZNF780AO75290 641 aaPredicted RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 DCTN3O75935 186 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 RAB3DO95716 219 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 PTTG1O95997 202 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 RPS17P08708 135 aaKnown RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 RPSAP08865 295 aaKnown RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 OR5H8P0DN80 308 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 ERGP11308 486 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 UGT2B7P16662 529 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 RAB3BP20337 219 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 PRPS1L1P21108 318 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 PSMB9P28065 219 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 CAPZBP47756 277 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 SERPINB9P50453 376 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 ERFP50548 548 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 IDH3GP51553 393 aaPredicted RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 TDGF1P3P51864 188 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 RND2P52198 227 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 APOC4P55056 127 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TAS2R19P59542 299 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 CXCR4P61073 352 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 PRR3P79522 188 aaKnown RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 SLC7A9P82251 487 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TFF3Q07654 80 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 PPIDQ08752 370 aaKnown RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 PSG7Q13046 419 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 ARFRP1Q13795 201 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 OR1Q1Q15612 314 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TBC1D28Q2M2D7 210 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TFDP3Q5H9I0 405 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 COA6Q5JTJ3 125 aaKnown RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 AVPI1Q5T686 147 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 OTPQ5XKR4 325 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 Q6P435 159 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 EPGNQ6UW88 154 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 LRRN1Q6UXK5 716 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TEX43Q6ZNM6 134 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 Q6ZS92 163 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 C10orf107Q8IVU9 208 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 H1FOOQ8IZA3 346 aaPredicted RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 NPWQ8N729 165 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 UBAC2Q8NBM4 344 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 OR5M1Q8NGP8 315 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 OR10J6PQ8NGY7 276 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 GEMIN6Q8WXD5 167 aaKnown RBP2.4□□□□□ -2.03
UBR3-211ENST00000487689 HGDQ93099 445 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 DDIT4LQ96D03 193 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 MRAP2Q96G30 205 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 FCRL1Q96LA6 429 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 Q96MT0 163 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TMEM56Q96MV1 263 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 C20orf144Q9BQM9 153 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 UGT2B28Q9BY64 529 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 SLC25A22Q9H936 323 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 UGT1A7Q9HAW7 530 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 UGT1A8Q9HAW9 530 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 FBXO8Q9NRD0 319 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 SLC2A9Q9NRM0 540 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 TMEM9Q9P0T7 183 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 CLCF1Q9UBD9 225 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 STOML2Q9UJZ1 356 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 SIGLEC9Q9Y336 463 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 V9GYQ6 96 aa2.4□□□□□ -2.03
UBR3-211ENST00000487689 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
UBR3-211ENST00000487689 PLECQ15149 4684 aaKnown RBP2.39□□□□□ -2.03
UBR3-211ENST00000487689 IGLV3-16A0A075B6K0 115 aa2.39□□□□□ -2.03
UBR3-211ENST00000487689 KIR2DL5BA0A0G2JN68 375 aa2.39□□□□□ -2.03
UBR3-211ENST00000487689 KIR2DL5BA0A0G2JPC4 375 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms