RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 Q3ZCU0 254 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 AADACL4Q5VUY2 407 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 NXNL2Q5VZ03 156 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 ELP2Q6IA86 826 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 DHFR2Q86XF0 187 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 DEFB107AQ8IZN7 70 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 LINC00311Q8N616 119 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 TMEM217Q8N7C4 229 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 Q8N9W7 124 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 TRMT10AQ8TBZ6 339 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 TOMM40LQ969M1 308 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 ST6GALNAC6Q969X2 333 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 NRBF2Q96F24 287 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 DUX3Q96PT4 197 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 MBOAT4Q96T53 435 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 APOL4Q9BPW4 351 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 RBM38Q9H0Z9 239 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 ZNF556Q9HAH1 456 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 SEPSECSQ9HD40 501 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 EXOSC4Q9NPD3 245 aaKnown RBP3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 ARGLU1Q9NWB6 273 aaPredicted RBP3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 TAS2R1Q9NYW7 299 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 TAGLN3Q9UI15 199 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 IKZF2Q9UKS7 526 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 PSG11Q9UQ72 335 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 STARD9Q9P2P6 4700 aa3.93□□□□□ -1.78
R3HDM1-218ENST00000487294 IGHV1-3A0A0C4DH29 117 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 IGKV1-12A0A0C4DH73 117 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 SIRPB1O00241 398 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 SLC33A1O00400 549 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 PRKYO43930 277 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 CST1P01037 141 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 IL1AP01583 271 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 IGKV1D-12P01611 117 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 GAPDHP04406 335 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 KRT8P05787 483 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 HCKP08631 526 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 MRPL3P09001 348 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 OR2T7P0C7T2 308 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 PRKACAP17612 351 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 ATF1P18846 271 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 CD1BP29016 333 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 C21orf33P30042 268 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 ZNF137PP52743 207 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 CRISP1P54107 249 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 MTCP1P56278 107 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 TMED1Q13445 227 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 DIAPH2-AS1Q14236 149 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 PTGES3Q15185 160 aaKnown RBP3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 KRBOX4Q5JUW0 171 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 FAM27D1Q5T7N8 215 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 TMEM236Q5W0B7 351 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 FAHD1Q6P587 224 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 TMEM179BQ7Z7N9 219 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 LYPD6Q86Y78 171 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 SLC35F2Q8IXU6 374 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 PRSS35Q8N3Z0 413 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 OR11H1Q8NG94 326 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 OR52M1Q8NGK5 317 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 OR2T10Q8NGZ9 312 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 ISOC1Q96CN7 298 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 ASB9Q96DX5 294 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 ADAT3Q96EY9 351 aaPredicted RBP3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 OPALINQ96PE5 141 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 PRRG3Q9BZD7 231 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 OR51J1Q9H342 316 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 PALMDQ9NP74 551 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 CALYQ9NYX4 217 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 TVP23BQ9NYZ1 205 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 IDI2-AS1Q9NZ38 188 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 LINC00527Q9UJ94 153 aa3.92□□□□□ -1.78
R3HDM1-218ENST00000487294 TRBV5-7A0A0A0MS05 114 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 TRAV24A0A0B4J272 114 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 LOC107986453A0A1B0GWG9 222 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 RPS10-NUDT3A0A1W2PQS6 291 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 FAM172BPA6NC97 362 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 GAGE12JA6NER3 117 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 METTL15A6NJ78 407 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 ZNF670-ZNF695F2Z2N8 137 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 HSD17B6O14756 317 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 ARPC1BO15143 372 aaKnown RBP3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 LDLRAD4O15165 306 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 MAGEB4O15481 346 aaPredicted RBP3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 TXNL1O43396 289 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 MOSP00540 346 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 DBTP11182 482 aaKnown RBP3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 GP9P14770 177 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 GZMHP20718 246 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 HTR1FP30939 366 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 SOX6P35712 828 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 VHLP40337 213 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 RFX2P48378 723 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 PCP4P48539 62 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 RASSF2P50749 326 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 CCR9P51686 369 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 RAB25P57735 213 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 ZP1P60852 638 aa3.91□□□□□ -1.78
R3HDM1-218ENST00000487294 ZNF616Q08AN1 781 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms