RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 D2HGDHQ8N465 521 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 OR1K1Q8NGR3 316 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF596Q8TC21 504 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ORAOV1Q8WV07 137 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 PSMF1Q92530 271 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 SGCZQ96LD1 299 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 DECR2Q9NUI1 292 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 PHF3Q92576 2039 aaKnown RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 RP1P56715 2156 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CLEC18AA5D8T8 446 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 LIPT2A6NK58 231 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 VENTXO95231 258 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 IGHEP01854 428 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TYMSP04818 313 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 EGR1P18146 543 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 FBLP22087 321 aaKnown RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CEACAM8P31997 349 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CDKN1BP46527 198 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF726P1Q15940 193 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TDRG1Q3Y452 100 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 UNQ5815/PRO19632Q6UWF5 114 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TEX43Q6ZNM6 134 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF818PQ6ZRF7 136 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 Q6ZWC4 215 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 FAM58AQ8N1B3 248 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CLEC18CQ8NCF0 446 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 OR56B2PQ8NGI1 322 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 IL1F10Q8WWZ1 152 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TMEM56Q96MV1 263 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 OR4C12Q96R67 309 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 RNF2Q99496 336 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 SLC35D1Q9NTN3 355 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF581Q9P0T4 197 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TMEM56-RWDD3S4R434 201 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 KIAA2026Q5HYC2 2103 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 KIR2DS1A0A191URI9 304 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 A0A1W2PPV4 95 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 FOXI3A8MTJ6 420 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 NPIPA2E9PIF3 369 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 NPIPA3F8WFD2 350 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 H3BMH7 237 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TSPAN2O60636 221 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 IGFBP4P22692 258 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 KIR2DS4P43632 304 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 RBX1P62877 108 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 KIR2DS1Q14954 304 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 SHBQ15464 509 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 RSPO4Q2I0M5 234 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 SHISA6Q6ZSJ9 500 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF525Q8N782 197 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CADM4Q8NFZ8 388 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 DNASE2BQ8WZ79 361 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 TAF15Q92804 592 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 GPR146Q96CH1 333 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 FAM122AQ96E09 287 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 MRPL18Q9H0U6 180 aaKnown RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 SPTBN5Q9NRC6 3674 aaKnown RBP5.37□□□□□ -1.55
VPS13D-209ENST00000487188 COL6A3P12111 3177 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 C5orf63A6NC05 138 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 CCL25O15444 150 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 SEMA4FO95754 770 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF17P17021 662 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 UBE2V1Q13404 147 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 AARDQ4LEZ3 155 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 FBLN7Q53RD9 439 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 TMEM211Q6ICI0 200 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 STPG4Q8N801 248 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 OR10G8Q8NGN5 311 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 GATAD1Q8WUU5 269 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-209ENST00000487188 ADIPOR1Q96A54 375 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 LYZL4Q96KX0 146 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 WDR61Q9GZS3 305 aaKnown RBP5.36□□□□□ -1.55
VPS13D-209ENST00000487188 PXMP4Q9Y6I8 212 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 A0A0C4DFX4 3053 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 PCNX3Q9H6A9 2034 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 TRAV39A0A0B4J263 110 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 A0A0U1RQV5 110 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 NPIPB13A6NJU9 1138 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 SNURFLB1AK76 121 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 C1QTNF9BB2RNN3 333 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 NPIPB4C9JG80 1138 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 NUPR1O60356 82 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 CLPSP04118 112 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 UCP1P25874 307 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 IER3P46695 156 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 GABRA2P47869 451 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 LRRC75BQ2VPJ9 315 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 HLA-DRB5Q30154 266 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 PLPPR5Q32ZL2 321 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 TPTE2P1Q5T6R2 138 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 C16orf47Q6ZP98 133 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-209ENST00000487188 WDFY1Q8IWB7 410 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 OR2D3Q8NGH3 330 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 OR5D13Q8NGL4 314 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 NOTCH4Q99466 2003 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 C17orf112F2Z3M2 114 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 H0Y980 276 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 NXPH2O95156 264 aa5.36□□□□□ -1.55
VPS13D-209ENST00000487188 TNFSF4P23510 183 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms