RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 FAM19A4Q96LR4 140 aa2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 KCNS3Q9BQ31 491 aa2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 OR52A5Q9H2C5 316 aa2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 RMND1Q9NWS8 449 aa2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 BTRCQ9Y297 605 aa2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 CSPG4Q6UVK1 2322 aa2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 INTS1Q8N201 2190 aaKnown RBP2.87□□□□□ -1.95
PRPF38A-203ENST00000487160 STAB1Q9NY15 2570 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 GOLGA8QA0A0J9YX86 632 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 M0R1X1 148 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 MANBAO00462 879 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 PRMT5O14744 637 aaPredicted RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 CETN3O15182 167 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 RTL8CO15255 209 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 ALOX12BO75342 701 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 NDUFS6O75380 124 aaKnown RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 CST4P01036 141 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 TEAD1P28347 426 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 APLNRP35414 380 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 PCK1P35558 622 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 CA7P43166 264 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 UBE2IP63279 158 aaKnown RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 ZNF816Q0VGE8 651 aaPredicted RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 NAB1Q13506 487 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 ATP6V1FQ16864 119 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 SLC25A35Q3KQZ1 300 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 YIF1BQ5BJH7 314 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 RESP18Q5W5W9 173 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 CLEC6AQ6EIG7 209 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 DRAM1Q8N682 238 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 ACBD4Q8NC06 268 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 LGALS14Q8TCE9 139 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 C17orf50Q8WW18 174 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 COX14Q96I36 57 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 EMC6Q9BV81 110 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 FRMD8P1Q9BZ68 369 aaPredicted RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 SYT4Q9H2B2 425 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 UCK1Q9HA47 277 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 MRM2Q9UI43 246 aaKnown RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 ENPP5Q9UJA9 477 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 NXT1Q9UKK6 140 aaKnown RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 SIGLEC7Q9Y286 467 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 NOSIPQ9Y314 301 aaKnown RBP2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 SIGLEC9Q9Y336 463 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 V9GYY9 64 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 JMJD1CQ15652 2540 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 CNTRLQ7Z7A1 2325 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 ZANQ9Y493 2812 aa2.86□□□□□ -1.95
PRPF38A-203ENST00000487160 OR5K4A6NMS3 321 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 ZNF850A8MQ14 1090 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 C9J4A7 227 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 DFFAO00273 331 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 PLIN3O60664 434 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 KLF7O75840 302 aaPredicted RBP2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 TRAPPC6AO75865 159 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 YEATS4O95619 227 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 GCGP01275 180 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 NQO2P16083 231 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 SYT1P21579 422 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 IL12BP29460 328 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 SLC35A1P78382 337 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 SLC35B1P78383 322 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 MAD2L1BPQ15013 274 aaPredicted RBP2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 STEAP4Q687X5 459 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 PDPK2PQ6A1A2 396 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 COMTD1Q86VU5 262 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 OR5T1Q8NG75 326 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 OR9A2Q8NGT5 310 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 OR6K6Q8NGW6 343 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 OR13G1Q8NGZ3 307 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 ANGPTL6Q8NI99 470 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 TMEM234Q8WY98 164 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 IP6K3Q96PC2 410 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 SFXN3Q9BWM7 321 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 RSPO3Q9BXY4 272 aaPredicted RBP2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 ARV1Q9H2C2 271 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 TMEM100Q9NV29 134 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 C21orf62Q9NYP8 219 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 KLF12Q9Y4X4 402 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 SEC16AO15027 2179 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 ABCA4P78363 2273 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 AKAP6Q13023 2319 aa2.85□□□□□ -1.95
PRPF38A-203ENST00000487160 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 TRAV40A0A0B4J280 105 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 CENPVL3A0A0U1RRI6 287 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 RAB19A4D1S5 217 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 MGAT4DA6NG13 374 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 TLCD2A6NGC4 264 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 TVP23AA6NH52 213 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 PSPHP1O15172 72 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 UPK1BO75841 260 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 SMC2O95347 1197 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 TTC4O95801 387 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 IGLV2-8P01709 118 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 CXCR1P25024 350 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 GNRHRP30968 328 aa2.84□□□□□ -1.95
PRPF38A-203ENST00000487160 SPAM1P38567 509 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms