RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TFAP2AP05549 437 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 CLEC2LP0C7M8 214 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 HKR1P10072 659 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 DTYMKP23919 212 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 GNG10P50151 68 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 EFNB2P52799 333 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 TMEM50BP56557 158 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 LOXL3P58215 753 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 ARFRP1Q13795 201 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 PLAC9Q5JTB6 97 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 LY6G6FQ5SQ64 297 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 DHRS7BQ6IAN0 325 aaPredicted RBP11.85□□□□□ -0.51
LIMS3-205ENST00000487150 OR8H3Q8N146 312 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 OR4F5Q8NH21 305 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 RAB2BQ8WUD1 216 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 AKR1E2Q96JD6 320 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 OCSTAMPQ9BR26 566 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 DIABLOQ9NR28 239 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 HILPDAQ9Y5L2 63 aa11.85□□□□□ -0.51
LIMS3-205ENST00000487150 NDUFA7O95182 113 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 RORCP51449 518 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 VBP1P61758 197 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 NCS1P62166 190 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 SRSF7Q16629 238 aaKnown RBP eCLIP11.84□□□□□ -0.51
LIMS3-205ENST00000487150 PNLIPRP3Q17RR3 467 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 GPR107Q5VW38 600 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 CAPSLQ8WWF8 208 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 IL1F10Q8WWZ1 152 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 AJUBAQ96IF1 538 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 GHITMQ9H3K2 345 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 Q9N2K0 584 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 TNFRSF19Q9NS68 423 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 CUBNO60494 3623 aa11.84□□□□□ -0.51
LIMS3-205ENST00000487150 TMEM89A2RUT3 159 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 FAM181BA6NEQ2 426 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 HSPA12AO43301 675 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 YPEL1O60688 119 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 FCGR3AP08637 254 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 GNB3P16520 340 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 ZBTB25P24278 435 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 RPS19P39019 145 aaKnown RBP11.83□□□□□ -0.52
LIMS3-205ENST00000487150 COMPP49747 757 aaPredicted RBP11.83□□□□□ -0.52
LIMS3-205ENST00000487150 GNG2P59768 71 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
LIMS3-205ENST00000487150 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 BAIAP2L2Q6UXY1 529 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 SLC25A48Q6ZT89 311 aaKnown RBP11.83□□□□□ -0.52
LIMS3-205ENST00000487150 OR2AK2Q8NG84 335 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 OR4A4PQ8NGN8 299 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 OR1L1Q8NH94 360 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 EDARADDQ8WWZ3 215 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 YPEL2Q96QA6 119 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 MDFIQ99750 246 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 ABHD14AQ9BUJ0 271 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 NPFFR1Q9GZQ6 430 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 DCSTAMPQ9H295 470 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 RANBP3Q9H6Z4 567 aaPredicted RBP11.83□□□□□ -0.52
LIMS3-205ENST00000487150 TCF19Q9Y242 345 aa11.83□□□□□ -0.52
LIMS3-205ENST00000487150 A0A075B6Q4 140 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 TRDCB7Z8K6 153 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 LY6LH3BQJ8 138 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 HSD17B6O14756 317 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 GAPDHP04406 335 aaKnown RBP11.82□□□□□ -0.52
LIMS3-205ENST00000487150 FAM106CPP0CH98 169 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 SOX6P35712 828 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 ZNF137PP52743 207 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 TMBIM6P55061 237 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 ZNF816Q0VGE8 651 aaPredicted RBP11.82□□□□□ -0.52
LIMS3-205ENST00000487150 PLA2G7Q13093 441 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 CTF1Q16619 201 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 MOGAT2Q3SYC2 334 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 MZT2AQ6P582 158 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 C12orf54Q6X4T0 127 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 Q6ZS49 121 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 OR4C13Q8NGP0 309 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 S100A16Q96FQ6 103 aaKnown RBP11.82□□□□□ -0.52
LIMS3-205ENST00000487150 CMTM3Q96MX0 182 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 HDHD3Q9BSH5 251 aaPredicted RBP11.82□□□□□ -0.52
LIMS3-205ENST00000487150 ABCG5Q9H222 651 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 KCNK7Q9Y2U2 307 aa11.82□□□□□ -0.52
LIMS3-205ENST00000487150 IGHV3-43A0A0B4J1X8 118 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 ITGB1BP1O14713 200 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 FABP7O15540 132 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 IGHV3-43DP0DP04 118 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 RAG2P55895 527 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 CDNFQ49AH0 187 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 MORN2Q502X0 79 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 PLA1AQ53H76 456 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 FAM71F2Q6NXP2 309 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 C11orf88Q6PI97 169 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 SAMD12Q8N8I0 201 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 OR10V1Q8NGI7 309 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 UBALD1Q8TB05 177 aa11.81□□□□□ -0.52
LIMS3-205ENST00000487150 SLC25A38Q96DW6 304 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms