RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 YIPF3Q9GZM5 350 aa6.07□□□□□ -1.44
XRN1-212ENST00000486211 MOB1AQ9H8S9 216 aa6.07□□□□□ -1.44
XRN1-212ENST00000486211 GID8Q9NWU2 228 aa6.07□□□□□ -1.44
XRN1-212ENST00000486211 PEMTQ9UBM1 199 aa6.07□□□□□ -1.44
XRN1-212ENST00000486211 PEF1Q9UBV8 284 aaKnown RBP6.07□□□□□ -1.44
XRN1-212ENST00000486211 OR52A1Q9UKL2 312 aa6.07□□□□□ -1.44
XRN1-212ENST00000486211 AP3M1Q9Y2T2 418 aa6.07□□□□□ -1.44
XRN1-212ENST00000486211 DNAH5Q8TE73 4624 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 IGHV3-43A0A0B4J1X8 118 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 H0YJX3 145 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 SDCBPO00560 298 aaPredicted RBP6.06□□□□□ -1.44
XRN1-212ENST00000486211 UBE2CO00762 179 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 PRODHO43272 600 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 RBMY1A1P0DJD3 496 aaKnown RBP6.06□□□□□ -1.44
XRN1-212ENST00000486211 IGHV3-43DP0DP04 118 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 SLC2A5P22732 501 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 MFAP2P55001 183 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 APOC4P55056 127 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 MTCP1P56278 107 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 DEFA5Q01523 94 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 RPEL1Q2QD12 228 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 Q3ZCU0 254 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 SPATS1Q496A3 300 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 PAN3Q58A45 887 aaKnown RBP6.06□□□□□ -1.44
XRN1-212ENST00000486211 CT45A1Q5HYN5 189 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 PLEKHG7Q6ZR37 379 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 IQCF1Q8N6M8 205 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 POM121L12Q8N7R1 296 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 POC5Q8NA72 575 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 BBS1Q8NFJ9 593 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 CT45A3Q8NHU0 189 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 UBALD1Q8TB05 177 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 DYNLRB2Q8TF09 96 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 PARP12Q9H0J9 701 aaKnown RBP6.06□□□□□ -1.44
XRN1-212ENST00000486211 C11orf68Q9H3H3 251 aaKnown RBP6.06□□□□□ -1.44
XRN1-212ENST00000486211 FBXL15Q9H469 300 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 RNF150Q9ULK6 438 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 GTF2A1LQ9UNN4 478 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 R4GMQ9 66 aa6.06□□□□□ -1.44
XRN1-212ENST00000486211 A0A0G2JLM5 398 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 H3BUA1 57 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 MAGEB4O15481 346 aaPredicted RBP6.05□□□□□ -1.44
XRN1-212ENST00000486211 APOL3O95236 402 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 CD40LGP29965 261 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 HMGA2P52926 109 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 MAGOHP61326 146 aaKnown RBP6.05□□□□□ -1.44
XRN1-212ENST00000486211 METTL21CQ5VZV1 264 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 ARPINQ7Z6K5 226 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 TMEM61Q8N0U2 210 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 ABHD5Q8WTS1 349 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 RFT1Q96AA3 541 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 DGCR6LQ9BY27 220 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 MRPL20Q9BYC9 149 aaKnown RBP6.05□□□□□ -1.44
XRN1-212ENST00000486211 TINAGL1Q9GZM7 467 aaPredicted RBP6.05□□□□□ -1.44
XRN1-212ENST00000486211 TMPRSS5Q9H3S3 457 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 RHOFQ9HBH0 211 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 SPAG4Q9NPE6 437 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 IL1RAPQ9NPH3 570 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 TECRQ9NZ01 308 aaKnown RBP6.05□□□□□ -1.44
XRN1-212ENST00000486211 IKZF2Q9UKS7 526 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 SAMD4AQ9UPU9 718 aaKnown RBP6.05□□□□□ -1.44
XRN1-212ENST00000486211 DHDHQ9UQ10 334 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 SELENOKQ9Y6D0 94 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 V9GYQ6 96 aa6.05□□□□□ -1.44
XRN1-212ENST00000486211 KIR2DL5BA0A0G2JN68 375 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 KIR2DL5BA0A0G2JPC4 375 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 C2orf70A6NJV1 201 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 EPM2AB3EWF7 344 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 BMPR1BO00238 502 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 RRHO14718 337 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 RBMXL2O75526 392 aaKnown RBP6.04□□□□□ -1.44
XRN1-212ENST00000486211 CSTBP04080 98 aaKnown RBP6.04□□□□□ -1.44
XRN1-212ENST00000486211 FOLR2P14207 255 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 FCGR2BP31994 310 aaPredicted RBP6.04□□□□□ -1.44
XRN1-212ENST00000486211 LINC00205P59089 165 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 ODF4Q2M2E3 257 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 SLC35D3Q5M8T2 416 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 C8orf82Q6P1X6 216 aaPredicted RBP6.04□□□□□ -1.44
XRN1-212ENST00000486211 ODF3L1Q8IXM7 274 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 KIR2DL5AQ8N109 375 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 AQP11Q8NBQ7 271 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 BVESQ8NE79 360 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 OR52B4Q8NGK2 314 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 OR5D18Q8NGL1 313 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 KIR2DL5BQ8NHK3 375 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 CNIH3Q8TBE1 160 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 ASB17Q8WXJ9 295 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 ARL11Q969Q4 196 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 TLCD1Q96CP7 247 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 APOL4Q9BPW4 351 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 FAM118AQ9NWS6 357 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 ZNF581Q9P0T4 197 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 SNX5Q9Y5X3 404 aa6.04□□□□□ -1.44
XRN1-212ENST00000486211 IGHV4-4A0A075B6R2 117 aa6.03□□□□□ -1.44
XRN1-212ENST00000486211 C11orf94C9JXX5 98 aa6.03□□□□□ -1.44
XRN1-212ENST00000486211 SYT7O43581 403 aa6.03□□□□□ -1.44
XRN1-212ENST00000486211 SERPINA3P01011 423 aa6.03□□□□□ -1.44
XRN1-212ENST00000486211 MRPL3P09001 348 aaKnown RBP6.03□□□□□ -1.44
XRN1-212ENST00000486211 ATF1P18846 271 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms