RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 UBE2J1Q9Y385 318 aaPredicted RBP4.61□□□□□ -1.67
COPS3-208ENST00000486032 ABCA1O95477 2261 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 WNK2Q9Y3S1 2297 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 IGKV1D-8A0A087WSZ0 117 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 KBTBD11-OT1A0A1B0GTJ5 212 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 TRDCB7Z8K6 153 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 INAFM1C9JVW0 142 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 M0R1W7 72 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 TOR1AO14656 332 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 HSPA12AO43301 675 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 NAPSAO96009 420 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 PMP2P02689 132 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 ARG1P05089 322 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GSTT2P0CG29 244 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GSTT2BP0CG30 244 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 IGHV1-8P0DP01 117 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 IGHV4-38-2P0DP08 117 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GZMHP20718 246 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GATA3P23771 443 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 HLA-DMAP28067 261 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 DLX6P56179 175 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 ARPC4P59998 168 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 PITPNAQ00169 270 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 PAX8Q06710 450 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GNMTQ14749 295 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 PLA1AQ53H76 456 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 SPANXN2Q5MJ10 180 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 FAM120AOSQ5T036 256 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 UTF1Q5T230 341 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GPR157Q5UAW9 335 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 OR52W1Q6IF63 320 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 PYHIN1Q6K0P9 492 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 BRD3OSQ6XYD6 125 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 Q6ZPA2 131 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 MOB1BQ7L9L4 216 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 BEST4Q8NFU0 473 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 OR6Q1Q8NGQ2 317 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 OR52I2Q8NH67 350 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 C22orf15Q8WYQ4 148 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 CORO2AQ92828 525 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 CREB3L1Q96BA8 519 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GALMQ96C23 342 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 ABHD1Q96SE0 405 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 TBX15Q96SF7 602 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GINS4Q9BRT9 223 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 BEX2Q9BXY8 128 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 MS4A7Q9GZW8 240 aaPredicted RBP4.6□□□□□ -1.67
COPS3-208ENST00000486032 RIMS4Q9H426 269 aaPredicted RBP4.6□□□□□ -1.67
COPS3-208ENST00000486032 OR2S2Q9NQN1 319 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 PTTG2Q9NZH5 202 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 OR1A1Q9P1Q5 309 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 ZNRD1Q9P1U0 126 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 GNG12Q9UBI6 72 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 SLC23A1Q9UHI7 598 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 OPN4Q9UHM6 478 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 POLR3KQ9Y2Y1 108 aaPredicted RBP4.6□□□□□ -1.67
COPS3-208ENST00000486032 RBM7Q9Y580 266 aaKnown RBP4.6□□□□□ -1.67
COPS3-208ENST00000486032 SOX21Q9Y651 276 aaPredicted RBP4.6□□□□□ -1.67
COPS3-208ENST00000486032 KPTNQ9Y664 436 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 SESN1Q9Y6P5 492 aa4.6□□□□□ -1.67
COPS3-208ENST00000486032 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.67
COPS3-208ENST00000486032 IGHV2-26A0A0B4J1V2 119 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 CENPVL3A0A0U1RRI6 287 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 LINC00854A0A1B0GVQ3 168 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 C17orf98A8MV24 154 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 RNASEK-C17orf49H0YIS7 233 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 C15orf65H3BRN8 121 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 J3QLI3 93 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 FABP7O15540 132 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 ORC5O43913 435 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 RBBP9O75884 186 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 LPLP06858 475 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 MELTFP08582 738 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 CGB3P0DN86 165 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 CGB7P0DN87 165 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 MMP9P14780 707 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 HNF1AP20823 631 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 DTYMKP23919 212 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 PRTN3P24158 256 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 FPR2P25090 351 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 PAX6P26367 422 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 PPP1CCP36873 323 aaKnown RBP4.59□□□□□ -1.67
COPS3-208ENST00000486032 KIR2DS4P43632 304 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 CBX5P45973 191 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 OR3A3P47888 321 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 INPP1P49441 399 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 LGALS4P56470 323 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 DGCR2P98153 550 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 SRSF2Q01130 221 aaKnown RBP4.59□□□□□ -1.67
COPS3-208ENST00000486032 KIR2DS1Q14954 304 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 HMGN3Q15651 99 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 CHRFAM7AQ494W8 412 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 IGSF11Q5DX21 431 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 ZNF880Q6PDB4 577 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 TRAT1Q6PIZ9 186 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 CCDC190Q86UF4 302 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 HOGA1Q86XE5 327 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 ABHD12Q8N2K0 398 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 C11orf42Q8N5U0 333 aa4.59□□□□□ -1.67
COPS3-208ENST00000486032 KIR3DL3Q8N743 410 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms