RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 THRSPQ92748 146 aa20.2■□□□□ 0.82
HLA-F-227ENST00000485513 PSORS1C1Q9UIG5 152 aa20.2■□□□□ 0.82
HLA-F-227ENST00000485513 COL7A1Q02388 2944 aa20.2■□□□□ 0.82
HLA-F-227ENST00000485513 UBE2QL1A1L167 161 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 RPLP1P05386 114 aaKnown RBP20.19■□□□□ 0.82
HLA-F-227ENST00000485513 MAPK3P27361 379 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-227ENST00000485513 VHLP40337 213 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 GPR50Q13585 617 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 RCN1Q15293 331 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 CXorf66Q5JRM2 361 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-227ENST00000485513 STEAP3Q658P3 488 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 LAIR2Q6ISS4 152 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 TFAP2CQ92754 450 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 DUX3Q96PT4 197 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 UQCC2Q9BRT2 126 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 TAF9BQ9HBM6 251 aa20.19■□□□□ 0.82
HLA-F-227ENST00000485513 RRP9O43818 475 aaKnown RBP20.18■□□□□ 0.82
HLA-F-227ENST00000485513 SIGIRRQ6IA17 410 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 FAM71E2Q8N5Q1 922 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 RAX2Q96IS3 184 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 DCLRE1BQ9H816 532 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 OR2S2Q9NQN1 319 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 PLCXD1Q9NUJ7 323 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 MBNL3Q9NUK0 354 aaKnown RBP20.18■□□□□ 0.82
HLA-F-227ENST00000485513 KCNIP1Q9NZI2 227 aa20.18■□□□□ 0.82
HLA-F-227ENST00000485513 H0YHG0 523 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 CCL24O00175 119 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 LANCL1O43813 399 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 PDCD6O75340 191 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 SOX6P35712 828 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 F2RL1P55085 397 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 FOXE3Q13461 319 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 VAX1Q5SQQ9 334 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 UNQ9370/PRO34162Q6UXP9 181 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 LCNL1Q6ZST4 164 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 BPIFB6Q8NFQ5 453 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 FAM46BQ96A09 425 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 RBMXL1Q96E39 390 aaKnown RBP20.17■□□□□ 0.82
HLA-F-227ENST00000485513 CYYR1Q96J86 154 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 HSPB9Q9BQS6 159 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 GHRLQ9UBU3 117 aa20.17■□□□□ 0.82
HLA-F-227ENST00000485513 ELANEP08246 267 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 RAB25P57735 213 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 LSAMPQ13449 338 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 MORN2Q502X0 79 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 ZNF554Q86TJ5 538 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 NANOGP1Q8N7R0 232 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 FBLIM1Q8WUP2 373 aa20.16■□□□□ 0.82
HLA-F-227ENST00000485513 VDAC1P21796 283 aa20.15■□□□□ 0.82
HLA-F-227ENST00000485513 GNMTQ14749 295 aa20.15■□□□□ 0.82
HLA-F-227ENST00000485513 RNF152Q8N8N0 203 aa20.15■□□□□ 0.82
HLA-F-227ENST00000485513 OR52L2PQ8NGH6 319 aa20.15■□□□□ 0.82
HLA-F-227ENST00000485513 MRPL30Q8TCC3 161 aaKnown RBP20.15■□□□□ 0.82
HLA-F-227ENST00000485513 CST11Q9H112 138 aa20.15■□□□□ 0.82
HLA-F-227ENST00000485513 ZMAT5Q9UDW3 170 aaKnown RBP20.15■□□□□ 0.82
HLA-F-227ENST00000485513 ERGIC3Q9Y282 383 aa20.15■□□□□ 0.82
HLA-F-227ENST00000485513 CDX1P47902 265 aaPredicted RBP20.14■□□□□ 0.81
HLA-F-227ENST00000485513 GP2P55259 537 aaKnown RBP20.14■□□□□ 0.81
HLA-F-227ENST00000485513 DEFB136Q30KP8 78 aa20.14■□□□□ 0.81
HLA-F-227ENST00000485513 OR8U1Q8NH10 309 aa20.14■□□□□ 0.81
HLA-F-227ENST00000485513 ABHD14AQ9BUJ0 271 aa20.14■□□□□ 0.81
HLA-F-227ENST00000485513 JPT1Q9UK76 154 aa20.14■□□□□ 0.81
HLA-F-227ENST00000485513 IGHG4P01861 327 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 PPP1CCP36873 323 aaKnown RBP20.13■□□□□ 0.81
HLA-F-227ENST00000485513 HTD2P86397 168 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 CFHR3Q02985 330 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 CD69Q07108 199 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 KIR2DS1Q14954 304 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 MMDQ15546 238 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 NKAPLQ5M9Q1 402 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 OGFRL1Q5TC84 451 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-227ENST00000485513 C11orf87Q6NUJ2 197 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 C5orf24Q7Z6I8 188 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 FKBP14Q9NWM8 211 aa20.13■□□□□ 0.81
HLA-F-227ENST00000485513 ZNF107Q9UII5 783 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-227ENST00000485513 IGF1P05019 195 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 UBBP0CG47 229 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 SLC2A2P11168 524 aaPredicted RBP20.12■□□□□ 0.81
HLA-F-227ENST00000485513 DGCR2P98153 550 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 INSL4Q14641 139 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 ACSM3Q53FZ2 586 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 NEDD4LQ96PU5 975 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 ZNF580Q9UK33 172 aa20.12■□□□□ 0.81
HLA-F-227ENST00000485513 MYF6P23409 242 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 GABPB1Q06547 395 aaPredicted RBP20.11■□□□□ 0.81
HLA-F-227ENST00000485513 DCTN2Q13561 401 aaKnown RBP20.11■□□□□ 0.81
HLA-F-227ENST00000485513 C6orf141Q5SZD1 244 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 FAM27D1Q5T7N8 215 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 ODF3L1Q8IXM7 274 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 MS4A15Q8N5U1 240 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 OR5M8Q8NGP6 311 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 KCTD7Q96MP8 289 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 B9D2Q9BPU9 175 aa20.11■□□□□ 0.81
HLA-F-227ENST00000485513 MRPL20Q9BYC9 149 aaKnown RBP20.11■□□□□ 0.81
HLA-F-227ENST00000485513 CASQ2O14958 399 aaPredicted RBP20.1■□□□□ 0.81
HLA-F-227ENST00000485513 YPEL1O60688 119 aa20.1■□□□□ 0.81
HLA-F-227ENST00000485513 RGS11O94810 467 aa20.1■□□□□ 0.81
HLA-F-227ENST00000485513 OR5H8P0DN80 308 aa20.1■□□□□ 0.81
HLA-F-227ENST00000485513 CHATP28329 748 aa20.1■□□□□ 0.81
HLA-F-227ENST00000485513 GLT8D1Q68CQ7 371 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms