RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 RBMS3Q6XE24 437 aaKnown RBP9.61□□□□□ -0.87
APTX-227ENST00000485479 SNX29P2Q8IUI4 249 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 MIXL1Q9H2W2 232 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 LINC00574Q9H8X3 128 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 SERPINE3A8MV23 424 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 H3BUI4 141 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 J3QR06 171 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 J3QRK9 145 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 F2RL2O00254 374 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 BET1O15155 118 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 IFNA2P01563 188 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 FBP1P09467 338 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 SOX6P35712 828 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 SCAND1P57086 179 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 TAS2R20P59543 309 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 HILS1P60008 231 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 SLC9A3R2Q15599 337 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 FAM189A2Q15884 450 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 CREB3L1Q96BA8 519 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 GALMQ96C23 342 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 KCTD12Q96CX2 325 aaKnown RBP9.61□□□□□ -0.87
APTX-227ENST00000485479 S100A16Q96FQ6 103 aaKnown RBP9.61□□□□□ -0.87
APTX-227ENST00000485479 CHIAQ9BZP6 476 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 SLIRPQ9GZT3 109 aaKnown RBP9.61□□□□□ -0.87
APTX-227ENST00000485479 DIABLOQ9NR28 239 aa9.61□□□□□ -0.87
APTX-227ENST00000485479 A0A087X0M5 115 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 A0A1B0GX30 115 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 H3BUX3 64 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 TALDO1P37837 337 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 RANBP1P43487 201 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 MIDNQ504T8 468 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 Q6YL49 198 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 OR10X1Q8NGY0 326 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 OR9G1Q8NH87 305 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 SSX3Q99909 188 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 MMP28Q9H239 520 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 AUNIPQ9H7T9 357 aa9.6□□□□□ -0.87
APTX-227ENST00000485479 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 XRCC3O43542 346 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 HTR1DP28221 377 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 RIPPLY3P57055 190 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 MORN2Q502X0 79 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 AP3S1Q92572 193 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 TRBV6-6A0A0A6YYG2 114 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 IGHV3-72A0A0B4J1Y9 119 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 FABP7O15540 132 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 HSPA12AO43301 675 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 GSTP1P09211 210 aaKnown RBP9.59□□□□□ -0.87
APTX-227ENST00000485479 CD34P28906 385 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 MNDAP41218 407 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 IER3P46695 156 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 UBA52P62987 128 aaKnown RBP9.59□□□□□ -0.87
APTX-227ENST00000485479 MOB1BQ7L9L4 216 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 ZNF439Q8NDP4 499 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 ZNF596Q8TC21 504 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 ACOT12Q8WYK0 555 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 BCL7BQ9BQE9 202 aa9.59□□□□□ -0.87
APTX-227ENST00000485479 RIMS4Q9H426 269 aaPredicted RBP9.59□□□□□ -0.87
APTX-227ENST00000485479 CCDC59Q9P031 241 aaKnown RBP9.59□□□□□ -0.87
APTX-227ENST00000485479 TRDCB7Z8K6 153 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 HLA-DQB1P01920 261 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 APOA1P02647 267 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 CEACAM6P40199 344 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 OR3A3P47888 321 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 BPIFB3P59826 476 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 MZT2AQ6P582 158 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 TRAT1Q6PIZ9 186 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 LYG1Q8N1E2 194 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.58□□□□□ -0.88
APTX-227ENST00000485479 BEND2Q8NDZ0 799 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 ABHD14BQ96IU4 210 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 ABHD14AQ9BUJ0 271 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.58□□□□□ -0.88
APTX-227ENST00000485479 DPM3Q9P2X0 92 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 JPT1Q9UK76 154 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 RNF150Q9ULK6 438 aa9.58□□□□□ -0.88
APTX-227ENST00000485479 SCGNO76038 276 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 PRRX1P54821 245 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 LINC00205P59089 165 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 TPTE2P1Q5T6R2 138 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 CNIH2Q6PI25 160 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 MCFD2Q8NI22 146 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 SNAPC3Q92966 411 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 TOMM40LQ969M1 308 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 RPEQ96AT9 228 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 MDFIQ99750 246 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 TBL2Q9Y4P3 447 aaKnown RBP9.57□□□□□ -0.88
APTX-227ENST00000485479 FAM181BA6NEQ2 426 aa9.57□□□□□ -0.88
APTX-227ENST00000485479 ZNF736B4DX44 427 aaPredicted RBP9.57□□□□□ -0.88
APTX-227ENST00000485479 HSD17B6O14756 317 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms