RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 OR8G2PQ6IF36 304 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF774Q6NX45 483 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 CNEP1R1Q8N9A8 125 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 OR6T1Q8NGN1 323 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 OR1P1Q8NH06 330 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF502Q8TBZ5 544 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 MUCL1Q96DR8 90 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 OR52B2Q96RD2 323 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF300Q96RE9 604 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ARV1Q9H2C2 271 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 AAMDCQ9H7C9 122 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 FAM53CQ9NYF3 392 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 Q9UF83 564 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 KCNS2Q9ULS6 477 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 DSCAMO60469 2012 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 OR6C6A6NF89 314 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 E7EQL1 145 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 KPNA4O00629 521 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 TRAF3IP2O43734 574 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 PRKYO43930 277 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 GPR137BO60478 399 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 CRLF1O75462 422 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 ASAH2BP0C7U1 165 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 SCGB1A1P11684 91 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 COX4I1P13073 169 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 JUNBP17275 347 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 CHATP28329 748 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 MFGE8Q08431 387 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 RBM39Q14498 530 aaKnown RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 FAM220AQ7Z4H9 259 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 PRSS35Q8N3Z0 413 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 DUSP18Q8NEJ0 188 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 OR51S1Q8NGJ8 323 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 OR10G9Q8NGN4 311 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 SDSLQ96GA7 329 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 SPATA25Q9BR10 227 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 COMMD4Q9H0A8 199 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 SPTAN1Q13813 2472 aaKnown RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 PCNX1Q96RV3 2341 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 FAM220BPB1ANY3 271 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 ANKRD65E5RJM6 399 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 CCDC22O60826 627 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 MRPL33O75394 65 aaKnown RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF25P17030 456 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 IFNGR2P38484 337 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 REG1BP48304 166 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 EFNA4P52798 201 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 DGCR2P98153 550 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 BSPH1Q075Z2 132 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 MBOAT2Q6ZWT7 520 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 Q75L30 129 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 WFDC11Q8NEX6 87 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 COQ8AQ8NI60 647 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 C10orf105Q8TEF2 133 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 Q8WTZ3 238 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 ASB17Q8WXJ9 295 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 OR2M2Q96R28 347 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 URM1Q9BTM9 101 aaKnown RBP4.36□□□□□ -1.71
CCDC39-205ENST00000485055 ACOT13Q9NPJ3 140 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 OR1A1Q9P1Q5 309 aa4.36□□□□□ -1.71
CCDC39-205ENST00000485055 PQLC2LA1A4F0 135 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CPSF4O95639 269 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 LY6G6DO95868 133 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 MT-CO2P00403 227 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 NPSP0C0P6 89 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 RPL12P30050 165 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 HILS1P60008 231 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 RPL27P61353 136 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CDK6Q00534 326 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ARPINQ7Z6K5 226 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 RNF113BQ8IZP6 322 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CLIP4Q8N3C7 705 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF676Q8N7Q3 588 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 OR2T12Q8NG77 320 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SCGB3A2Q96PL1 93 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SIGMAR1Q99720 223 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CHST5Q9GZS9 411 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ENY2Q9NPA8 101 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SLC7A10Q9NS82 523 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 STUB1Q9UNE7 303 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ANGPT4Q9Y264 503 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SPTBN1Q01082 2364 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 COL12A1Q99715 3063 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 IGLV3-9A0A075B6K5 115 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 OR7A10O76100 309 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 NDUFB4O95168 129 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 GCGP01275 180 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 IGHV4-39P01824 125 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 H2AFB1P0C5Y9 115 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SNRPBP14678 240 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF14P17017 642 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TBPP20226 339 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SLC6A1P30531 599 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 PYCR1P32322 319 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TIGITQ495A1 244 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TSPO2Q5TGU0 170 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TNFAIP8L2Q6P589 184 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms