RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 OCSTAMPQ9BR26 566 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 TM2D1Q9BX74 207 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 LPAR5Q9H1C0 372 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 Q9H521 79 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 CHMP1AQ9HD42 196 aaPredicted RBP9.79□□□□□ -0.84
MSH5-216ENST00000484309 NDUFB11Q9NX14 153 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 KCNIP1Q9NZI2 227 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 MOB4Q9Y3A3 225 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 MEGF8Q7Z7M0 2845 aa9.79□□□□□ -0.84
MSH5-216ENST00000484309 SHISA3A0PJX4 238 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 SMIM30A4D0T7 59 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 FAM90A9PA6NNJ1 464 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 DENRO43583 198 aaKnown RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 GAPDHP04406 335 aaKnown RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 FAM106CPP0CH98 169 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 CD37P11049 281 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 IL3RAP26951 378 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 PSMB9P28065 219 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 PPP1CCP36873 323 aaKnown RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 ZNF134P52741 427 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 OR10A3P58181 314 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 ZNF816Q0VGE8 651 aaPredicted RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 PLA2G7Q13093 441 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 CT45A1Q5HYN5 189 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 TRAT1Q6PIZ9 186 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 Q6ZPA2 131 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 OR8H3Q8N146 312 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 SVOPQ8N4V2 548 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 LINC00311Q8N616 119 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 CT45A3Q8NHU0 189 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 CITED2Q99967 270 aaPredicted RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 HDHD3Q9BSH5 251 aaPredicted RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 WNT10AQ9GZT5 417 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 OR2S2Q9NQN1 319 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 MBNL3Q9NUK0 354 aaKnown RBP9.78□□□□□ -0.84
MSH5-216ENST00000484309 PLEKHJ1Q9NW61 149 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 V9GY05 133 aa9.78□□□□□ -0.84
MSH5-216ENST00000484309 A0A1W2PRX2 142 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 ZNF736B4DX44 427 aaPredicted RBP9.77□□□□□ -0.85
MSH5-216ENST00000484309 VEGFCP49767 419 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 C22orf42Q6IC83 251 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 C10orf99Q6UWK7 81 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 SLC25A48Q6ZT89 311 aaKnown RBP9.77□□□□□ -0.85
MSH5-216ENST00000484309 OR2W3Q7Z3T1 314 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 THNSL2Q86YJ6 484 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 C1QL4Q86Z23 238 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 SPARTQ8N0X7 666 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 WIPF2Q8TF74 440 aaPredicted RBP9.77□□□□□ -0.85
MSH5-216ENST00000484309 RTN4IP1Q8WWV3 396 aaPredicted RBP9.77□□□□□ -0.85
MSH5-216ENST00000484309 FAM3DQ96BQ1 224 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 URM1Q9BTM9 101 aaKnown RBP9.77□□□□□ -0.85
MSH5-216ENST00000484309 RAB9BQ9NP90 201 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 AK3Q9UIJ7 227 aa9.77□□□□□ -0.85
MSH5-216ENST00000484309 RRP15Q9Y3B9 282 aaKnown RBP9.77□□□□□ -0.85
MSH5-216ENST00000484309 A0A0B4J203 849 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 TMEM272A0A1B0GTI8 110 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 TRDV1A0A1B0GX56 115 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 KCNAB3O43448 404 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 WIPF1O43516 503 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 MYL9P24844 172 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 HMGN3Q15651 99 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 C2orf76Q3KRA6 126 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 MORN2Q502X0 79 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 UBE2UQ5VVX9 321 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 CENPVQ7Z7K6 275 aaPredicted RBP9.76□□□□□ -0.85
MSH5-216ENST00000484309 TGIF2LXQ8IUE1 241 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 C8orf31Q8N9H6 132 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 OR5AU1Q8NGC0 362 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 IL1F10Q8WWZ1 152 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 ST6GALNAC6Q969X2 333 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 ARHGAP5-AS1Q96IT6 56 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 EAF1Q96JC9 268 aaPredicted RBP9.76□□□□□ -0.85
MSH5-216ENST00000484309 ABHD14AQ9BUJ0 271 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 STEAP1Q9UHE8 339 aa9.76□□□□□ -0.85
MSH5-216ENST00000484309 FOXI3A8MTJ6 420 aaPredicted RBP9.75□□□□□ -0.85
MSH5-216ENST00000484309 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 M0QZK8 103 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 PDCD5O14737 125 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 NAPSAO96009 420 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 DEFA6Q01524 100 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 TMEM30BQ3MIR4 351 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 Q3ZCU0 254 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 CD200R1LQ6Q8B3 271 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 IZUMO1Q8IYV9 350 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 C5orf56Q8N8D9 126 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 GALMQ96C23 342 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 PECRQ9BY49 303 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 LINC00527Q9UJ94 153 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 JPT1Q9UK76 154 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 LRRC42Q9Y546 428 aa9.75□□□□□ -0.85
MSH5-216ENST00000484309 A0A075B6Q4 140 aa9.74□□□□□ -0.85
MSH5-216ENST00000484309 TRAV1-2A0A0B4J238 106 aa9.74□□□□□ -0.85
MSH5-216ENST00000484309 NCBP2LA6PVI3 153 aaKnown RBP9.74□□□□□ -0.85
MSH5-216ENST00000484309 LDLRAD4O15165 306 aa9.74□□□□□ -0.85
MSH5-216ENST00000484309 ST8SIA5O15466 376 aa9.74□□□□□ -0.85
MSH5-216ENST00000484309 MRPS14O60783 128 aaKnown RBP9.74□□□□□ -0.85
MSH5-216ENST00000484309 SLC2A2P11168 524 aaPredicted RBP9.74□□□□□ -0.85
MSH5-216ENST00000484309 RAB3BP20337 219 aa9.74□□□□□ -0.85
MSH5-216ENST00000484309 OR3A3P47888 321 aa9.74□□□□□ -0.85
MSH5-216ENST00000484309 TMEM50BP56557 158 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms