RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 OR3A1P47881 315 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 RAB32Q13637 225 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 TESK1Q15569 626 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 GGNBP1Q5YKI7 109 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 ADAM5Q6NVV9 412 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 H1FOOQ8IZA3 346 aaPredicted RBP7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR8H3Q8N146 312 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 BOLLQ8N9W6 283 aaKnown RBP7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR4A4PQ8NGN8 299 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 TAF9BQ9HBM6 251 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 OR5AC2Q9NZP5 309 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 KIF25Q9UIL4 384 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 PCDHB10Q9UN67 800 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 WIPI2Q9Y4P8 454 aa7.41□□□□□ -1.22
CDC42SE1-204ENST00000483763 ASH1LQ9NR48 2969 aaKnown RBP7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 SRRM5B3KS81 715 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 PHF1O43189 567 aaPredicted RBP7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 ZNF737O75373 536 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 IGHV1-46P01743 117 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 HEXAP06865 529 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 PTAFRP25105 342 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 MDH2P40926 338 aaKnown RBP7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 CA7P43166 264 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 GLIPR1P48060 266 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 ADIPOQQ15848 244 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 TBC1D26Q86UD7 250 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 C2orf50Q96LR7 162 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 DCTN5Q9BTE1 182 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 CABLES2Q9BTV7 478 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 GCM1Q9NP62 436 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 KCNIP3Q9Y2W7 256 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 SPTBN1Q01082 2364 aaKnown RBP7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 HIVEP3Q5T1R4 2406 aa7.4□□□□□ -1.22
CDC42SE1-204ENST00000483763 C3orf85A0A1B0GTC6 90 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 RPS10-NUDT3A0A1W2PQS6 291 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 MSGN1A6NI15 193 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 DIRAS3O95661 229 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 LHBP01229 141 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 CTXN2P0C2S0 81 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 PRDX2P32119 198 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 IAH1Q2TAA2 248 aaPredicted RBP7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 SMIM21Q3B7S5 101 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 ALKAL2Q6UX46 152 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 LIAT1Q6ZQX7 453 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 FOXRED2Q8IWF2 684 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 ZNRF1Q8ND25 227 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 NUP37Q8NFH4 326 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 OR1L1Q8NH94 360 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 NINJ1Q92982 152 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 C18orf12Q96KH6 178 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 TMEM68Q96MH6 324 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 OR2W1Q9Y3N9 320 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 SVEP1Q4LDE5 3571 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 DSCAMO60469 2012 aa7.4□□□□□ -1.23
CDC42SE1-204ENST00000483763 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 A0A1B0GW55 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 C12orf77C9JDV5 145 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 SPDEFO95238 335 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 TACC2O95359 2948 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 OR4A8P0C604 315 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L2P0CJ85 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L3P0CJ86 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L4P0CJ87 422 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L5P0CJ88 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L6P0CJ89 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L7P0CJ90 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 SSTR5P35346 364 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 CFHR2P36980 270 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 GABRA2P47869 451 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 HMGN3Q15651 99 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4L9Q6RFH8 374 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 MEX3BQ6ZN04 569 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 SLC35G3Q8N808 338 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 LRTM2Q8N967 370 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 MRGPRDQ8TDS7 321 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 NEUROG1Q92886 237 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DUX4Q9UBX2 424 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 NKX2-6A6NCS4 301 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 NPIPB11E5RHQ5 1161 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 GPR31O00270 319 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 PGLYRP1O75594 196 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 RLN2P04090 185 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 CCL8P80075 99 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 CYCSP99999 105 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 ODF1Q14990 250 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 DMRTC2Q8IXT2 367 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 KCNRGQ8N5I3 272 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 OR52M1Q8NGK5 317 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 OR13A1Q8NGR1 328 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 TMEM222Q9H0R3 208 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 ESRP2Q9H6T0 727 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 MAB21L2Q9Y586 359 aa7.39□□□□□ -1.23
CDC42SE1-204ENST00000483763 TMEM30CPA0ZSE6 113 aa7.38□□□□□ -1.23
CDC42SE1-204ENST00000483763 RAB19A4D1S5 217 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms