RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 NDUFB3O43676 98 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 CREBL2O60519 120 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-226ENST00000483656 SFT2D2O95562 160 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 IGHV4-39P01824 125 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 WNT2P09544 360 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 IGHV3-43DP0DP04 118 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 CXCL3P19876 107 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 IL2RGP31785 369 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 CEACAM6P40199 344 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 TMEM33P57088 247 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 LOXL3P58215 753 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 TAS2R31P59538 309 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 HTD2P86397 168 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 MEF2CQ06413 473 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF273Q14593 569 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 TMEM155Q4W5P6 130 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 C4orf46Q504U0 113 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 LRRC10Q5BKY1 277 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 TMEM200BQ69YZ2 307 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 SLC38A6Q8IZM9 456 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 ZNF565Q8N9K5 539 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 RAB1CQ92928 201 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 DACT3Q96B18 629 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-226ENST00000483656 GALMQ96C23 342 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 SLC5A7Q9GZV3 580 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 CCL28Q9NRJ3 127 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 C14orf166Q9Y224 244 aaKnown RBP8.34□□□□□ -1.07
HDAC6-226ENST00000483656 DSCAML1Q8TD84 2053 aa8.34□□□□□ -1.07
HDAC6-226ENST00000483656 AKAP6Q13023 2319 aa8.34□□□□□ -1.08
HDAC6-226ENST00000483656 FBN2P35556 2912 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 TRGV10A0A0A0MS01 117 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 KBTBD11-OT1A0A1B0GTJ5 212 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 hADV38S2A0JD32 116 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 CRYM-AS1A6NIL9 109 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF729A6NN14 1252 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 F5H0A9 414 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 SPINT2O43291 252 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 SSNA1O43805 119 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 MMP23AO75900 390 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 CCNKO75909 580 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 IGLV2-14P01704 120 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 HLA-AP01891 365 aaKnown RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 PPP1CCP36873 323 aaKnown RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 DLX6P56179 175 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 PIGPP57054 158 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 LTC4SQ16873 150 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 ANKRD55Q3KP44 614 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 PHLDA2Q53GA4 152 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 TMEM128Q5BJH2 165 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF818PQ6ZRF7 136 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 C12orf45Q8N5I9 185 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 OR2AK2Q8NG84 335 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 OR10V1Q8NGI7 309 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 NRGNQ92686 78 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 WDR89Q96FK6 387 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 C5orf30Q96GV9 206 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 FYTTD1Q96QD9 318 aaKnown RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 CCL19Q99731 98 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 RANGRFQ9HD47 186 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 SLC2A9Q9NRM0 540 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 PRR13Q9NZ81 148 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 CLN8Q9UBY8 286 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 UBE2J1Q9Y385 318 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-226ENST00000483656 LINC00312Q9Y6C7 94 aa8.33□□□□□ -1.08
HDAC6-226ENST00000483656 ITPR3Q14573 2671 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 BOLA2-SMG1P6H3BVE0 249 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 GPR31O00270 319 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 HSD17B6O14756 317 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 HSPA12AO43301 675 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 DUS4LO95620 317 aaKnown RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 OR8U9P0C7N5 309 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 CCL3L1P16619 93 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 OMGP23515 440 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 GPR6P46095 362 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 LUMP51884 338 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 RIPPLY3P57055 190 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 KRTAP10-9P60411 292 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 ERVFRD-1P60508 538 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 RND3P61587 244 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 RPL31P62899 125 aaKnown RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 CD83Q01151 205 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 SLC9A3R2Q15599 337 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 MORN2Q502X0 79 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 WDR25Q64LD2 544 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 LIN54Q6MZP7 749 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 LPCAT3Q6P1A2 487 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 SPICQ8N5J4 248 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF525Q8N782 197 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 OR8U1Q8NH10 309 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 CASTOR1Q8WTX7 329 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 H1FXQ92522 213 aaKnown RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 PPP1R14BQ96C90 147 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 NEIL1Q96FI4 390 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 TIMD4Q96H15 378 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF486Q96H40 463 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 GPHA2Q96T91 129 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms