RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 LINC00310P59036 64 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 ACSF3Q4G176 576 aaPredicted RBP10.1□□□□□ -0.79
VTI1A-205ENST00000483122 C22orf15Q8WYQ4 148 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 PCDH15Q96QU1 1955 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 IGHV5-51A0A0C4DH38 117 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 DUXBA0A1W2PPF3 345 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 SLC22A20A6NK97 555 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 M0R135 149 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 PDCD6O75340 191 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 PSMB3P49720 205 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 UBE2NP61088 152 aaKnown RBP10.09□□□□□ -0.79
VTI1A-205ENST00000483122 SERF2P84101 59 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 MALLQ13021 153 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 HIST3H3Q16695 136 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM211Q6ICI0 200 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 Q6ZRM9 215 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 Q6ZSR3 168 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 WDR5BQ86VZ2 330 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 STPG4Q8N801 248 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF799Q96GE5 643 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 HSPB9Q9BQS6 159 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 OR51B6Q9H340 312 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 SLC25A22Q9H936 323 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM9BQ9NQ34 198 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 IGHV3-20A0A0C4DH32 117 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 C1QTNF9BB2RNN3 333 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 SCTP09683 121 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 HOXB2P14652 356 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 NTSR1P30989 418 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 COMPP49747 757 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-205ENST00000483122 SELENOTP62341 195 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 LCN2P80188 198 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 PHYHD1Q5SRE7 291 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 ETFRF1Q6IPR1 90 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-205ENST00000483122 BORCS8Q96FH0 119 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 OR4C12Q96R67 309 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 WDR61Q9GZS3 305 aaKnown RBP10.09□□□□□ -0.79
VTI1A-205ENST00000483122 PSENENQ9NZ42 101 aa10.09□□□□□ -0.79
VTI1A-205ENST00000483122 C20orf202A1L168 122 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 NPPCP23582 126 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 PPP1CBP62140 327 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 RANP62826 216 aaKnown RBP10.08□□□□□ -0.8
VTI1A-205ENST00000483122 DAZAP2Q15038 168 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-205ENST00000483122 RNPS1Q15287 305 aaKnown RBP10.08□□□□□ -0.8
VTI1A-205ENST00000483122 OR8B8Q15620 311 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 ASCL4Q6XD76 172 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 AGBL5Q8NDL9 886 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 GJC3Q8NFK1 279 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 OR5D13Q8NGL4 314 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 EXTL1Q92935 676 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 SPSB1Q96BD6 273 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 GAL3ST2Q9H3Q3 398 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 PATZ1Q9HBE1 687 aaKnown RBP10.08□□□□□ -0.8
VTI1A-205ENST00000483122 RNF114Q9Y508 228 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 EGR1P18146 543 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 MSR1P21757 451 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 TPPP2P59282 170 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 LEMD1Q68G75 181 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 ACSM6Q6P461 480 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 SHISA6Q6ZSJ9 500 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 Q6ZVH6 145 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 OR10V1Q8NGI7 309 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 PINX1Q96BK5 328 aaKnown RBP10.08□□□□□ -0.8
VTI1A-205ENST00000483122 C10orf35Q96D05 121 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 CIB3Q96Q77 187 aaPredicted RBP10.08□□□□□ -0.8
VTI1A-205ENST00000483122 RAB40CQ96S21 281 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 PRUNE2Q8WUY3 3088 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 RALGAPA1Q6GYQ0 2036 aa10.08□□□□□ -0.8
VTI1A-205ENST00000483122 UBE2L5PA0A1B0GUS4 154 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 NKX6-3A6NJ46 265 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 H3BMH7 237 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-205ENST00000483122 WNT2P09544 360 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 SRFP11831 508 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 CEACAM8P31997 349 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-205ENST00000483122 SOX8P57073 446 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 YPEL5P62699 121 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 OR1K1Q8NGR3 316 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 TAF15Q92804 592 aaKnown RBP eCLIP10.07□□□□□ -0.8
VTI1A-205ENST00000483122 TRBV11-1A0A0K0K1C0 115 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 H0Y980 276 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 AQP7O14520 342 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 ITGB1BP1O14713 200 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 PAGE4O60829 102 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 PGLYRP1O75594 196 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-205ENST00000483122 SERF1AO75920 110 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 OTX1P32242 354 aaPredicted RBP10.07□□□□□ -0.8
VTI1A-205ENST00000483122 CNN3Q15417 329 aaKnown RBP10.07□□□□□ -0.8
VTI1A-205ENST00000483122 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 OXGR1Q96P68 337 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 FBRSQ9HAH7 460 aa10.07□□□□□ -0.8
VTI1A-205ENST00000483122 ELOVL5Q9NYP7 299 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms