RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 C1orf162Q8NEQ5 155 aaPredicted RBP12.2□□□□□ -0.46
CHD3-211ENST00000481999 OR4D5Q8NGN0 318 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 FAM57AQ8TBR7 257 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 TMEM222Q9H0R3 208 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 WFDC1Q9HC57 220 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 IGKV1D-13A0A0B4J2D9 117 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 A6NLC8 198 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 C9JQL5 133 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 OR2H2O95918 312 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 TK1P04183 234 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 IGKV1-13P0DP09 117 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 NFYBP25208 207 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 P2RY6Q15077 328 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 MIDNQ504T8 468 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 MEX3BQ6ZN04 569 aaKnown RBP12.2□□□□□ -0.46
CHD3-211ENST00000481999 PLPPR1Q8TBJ4 325 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 ZCCHC14Q8WYQ9 949 aaKnown RBP12.2□□□□□ -0.46
CHD3-211ENST00000481999 Q9N2K0 584 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 A0A0G2JNJ9 132 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 NXPH2O95156 264 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 CCKARP32238 428 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 PEA15Q15121 130 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 C11orf53Q8IXP5 236 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 LINC00518Q8N0U6 118 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 DMBX1Q8NFW5 382 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
CHD3-211ENST00000481999 IL1F10Q8WWZ1 152 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 Q9UFV3 132 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 RCL1Q9Y2P8 373 aaKnown RBP12.19□□□□□ -0.46
CHD3-211ENST00000481999 STRAPQ9Y3F4 350 aaKnown RBP12.19□□□□□ -0.46
CHD3-211ENST00000481999 LRP5LA4QPB2 252 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 SNCAP37840 140 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 CAMLGP49069 296 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 RAB13P51153 203 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 AVPI1Q5T686 147 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 Q6P435 159 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 OR8G5Q8NG78 346 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 AKR1E2Q96JD6 320 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 SPIN2AQ99865 258 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 SPIN2BQ9BPZ2 258 aa12.19□□□□□ -0.46
CHD3-211ENST00000481999 PARP12Q9H0J9 701 aaKnown RBP12.19□□□□□ -0.46
CHD3-211ENST00000481999 UBE2J1Q9Y385 318 aaPredicted RBP12.19□□□□□ -0.46
CHD3-211ENST00000481999 TRDCB7Z8K6 153 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 PSPNO60542 156 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 GNRHRP30968 328 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 RND3P61587 244 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 ZNF565Q8N9K5 539 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 SECTM1Q8WVN6 248 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 DEGS1O15121 323 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 TNFSF12O43508 249 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 PPT1P50897 306 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 ERVK11-1P61568 191 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 NHLH2Q02577 135 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 GFRALQ6UXV0 394 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 PKIBQ9C010 78 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 C19orf12Q9NSK7 152 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
CHD3-211ENST00000481999 KIR2DS1A0A191URI9 304 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
CHD3-211ENST00000481999 PRH1P02810 166 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 PGA5P0DJD9 388 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 TIMP3P35625 211 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 KIR2DS4P43632 304 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 KCNJ3P48549 501 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 KIR2DS1Q14954 304 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 GUK1Q16774 197 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 SPIN3Q5JUX0 258 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 TBC1D26Q86UD7 250 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 ZNF695Q8IW36 515 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 OR2Z1Q8NG97 314 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 BOD1Q96IK1 185 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 ESRP2Q9H6T0 727 aaKnown RBP12.17□□□□□ -0.46
CHD3-211ENST00000481999 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 NKX2-6A6NCS4 301 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 A8MXE2 369 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 CRYBA1P05813 215 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 PAX6P26367 422 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 CEACAM8P31997 349 aaPredicted RBP12.17□□□□□ -0.46
CHD3-211ENST00000481999 NKX2-1P43699 371 aaPredicted RBP12.17□□□□□ -0.46
CHD3-211ENST00000481999 HOXA1P49639 335 aaPredicted RBP12.17□□□□□ -0.46
CHD3-211ENST00000481999 EWSR1Q01844 656 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHD3-211ENST00000481999 KRTCAP3Q53RY4 240 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 OR2C3Q8N628 320 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 HSD17B11Q8NBQ5 300 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 ABHD14BQ96IU4 210 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 USB1Q9BQ65 265 aaKnown RBP12.17□□□□□ -0.46
CHD3-211ENST00000481999 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
CHD3-211ENST00000481999 J3QW42 95 aa12.16□□□□□ -0.46
CHD3-211ENST00000481999 CTXN2P0C2S0 81 aa12.16□□□□□ -0.46
CHD3-211ENST00000481999 GCH1P30793 250 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms