RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 FKBP14Q9NWM8 211 aa14.59□□□□□ -0.07
CLK1-211ENST00000481641 FAM90A10PA6NDY2 464 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 FAM90A7PA6NKC0 464 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 FAM90A23PA8MXZ1 464 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 ANKRD65E5RJM6 399 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 AP4M1O00189 453 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 SC5DO75845 299 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 MYCNOSP40205 109 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 ZNF137PP52743 207 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 NKAPLQ5M9Q1 402 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 OR10K2Q6IF99 312 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 ZNF695Q8IW36 515 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 MRPL30Q8TCC3 161 aaKnown RBP14.58□□□□□ -0.08
CLK1-211ENST00000481641 P2RX4Q99571 388 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 RASL11BQ9BPW5 248 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 OR2S2Q9NQN1 319 aa14.58□□□□□ -0.08
CLK1-211ENST00000481641 DNAH9Q9NYC9 4486 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 CASQ2O14958 399 aaPredicted RBP14.57□□□□□ -0.08
CLK1-211ENST00000481641 PDCD6O75340 191 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 PPP1CCP36873 323 aaKnown RBP14.57□□□□□ -0.08
CLK1-211ENST00000481641 GABPB1Q06547 395 aaPredicted RBP14.57□□□□□ -0.08
CLK1-211ENST00000481641 EGFEM1PQ0D2K5 195 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 GPR50Q13585 617 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 PNLIPRP3Q17RR3 467 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 DEFB136Q30KP8 78 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 MORN2Q502X0 79 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 ACSM3Q53FZ2 586 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 TEX38Q6PEX7 206 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 UNQ9370/PRO34162Q6UXP9 181 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 COMMD1Q8N668 190 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 NKAIN3Q8N8D7 197 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 RAX2Q96IS3 184 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 UQCC2Q9BRT2 126 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 TMED9Q9BVK6 235 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 KCNK15Q9H427 330 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 RAB9BQ9NP90 201 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 MBNL3Q9NUK0 354 aaKnown RBP14.57□□□□□ -0.08
CLK1-211ENST00000481641 ERGIC3Q9Y282 383 aa14.57□□□□□ -0.08
CLK1-211ENST00000481641 MAPK3P27361 379 aaPredicted RBP14.56□□□□□ -0.08
CLK1-211ENST00000481641 RAB25P57735 213 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 LSAMPQ13449 338 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 TRAT1Q6PIZ9 186 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 LRRTM1Q86UE6 522 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 FAM71E2Q8N5Q1 922 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 RITA1Q96K30 269 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 SULT4A1Q9BR01 284 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 DCLRE1BQ9H816 532 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 KCNIP1Q9NZI2 227 aa14.56□□□□□ -0.08
CLK1-211ENST00000481641 COL7A1Q02388 2944 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 PTGES3LE9PB15 166 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 TXNL1O43396 289 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 LANCL1O43813 399 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 CA11O75493 328 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 GLAP06280 429 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 CDK1P06493 297 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 VSIG8P0DPA2 414 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 SLC2A2P11168 524 aaPredicted RBP14.55□□□□□ -0.08
CLK1-211ENST00000481641 MYF6P23409 242 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 TMEM30BQ3MIR4 351 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 ODF3L1Q8IXM7 274 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 FAAP24Q9BTP7 215 aa14.55□□□□□ -0.08
CLK1-211ENST00000481641 H0YHG0 523 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 CCL24O00175 119 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 CNTFRP26992 372 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 CHATP28329 748 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 SOX6P35712 828 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 OR3A3P47888 321 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 CXorf66Q5JRM2 361 aaPredicted RBP14.54□□□□□ -0.08
CLK1-211ENST00000481641 RBM48Q5RL73 367 aaKnown RBP14.54□□□□□ -0.08
CLK1-211ENST00000481641 C6orf141Q5SZD1 244 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 C11orf87Q6NUJ2 197 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 C6orf201Q7Z4U5 140 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 OR8H1Q8NGG4 311 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 DPF1Q92782 380 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 NICN1Q9BSH3 213 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 ABHD14AQ9BUJ0 271 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 MND1Q9BWT6 205 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 MRPL20Q9BYC9 149 aaKnown RBP14.54□□□□□ -0.08
CLK1-211ENST00000481641 CST11Q9H112 138 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 GHRLQ9UBU3 117 aa14.54□□□□□ -0.08
CLK1-211ENST00000481641 LSM2Q9Y333 95 aaKnown RBP14.54□□□□□ -0.08
CLK1-211ENST00000481641 HTR2CP28335 458 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 SLC6A1P30531 599 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 CFHR3Q02985 330 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 FOXE3Q13461 319 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 MMDQ15546 238 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 C1orf100Q5SVJ3 147 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 STEAP3Q658P3 488 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 CEACAM19Q7Z692 300 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 THRSPQ92748 146 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 NEDD4LQ96PU5 975 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 MCRIP2Q9BUT9 160 aaKnown RBP14.53□□□□□ -0.08
CLK1-211ENST00000481641 GON7Q9BXV9 100 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 GPR61Q9BZJ8 451 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 NKX1-2Q9UD57 310 aaPredicted RBP14.53□□□□□ -0.08
CLK1-211ENST00000481641 JPT1Q9UK76 154 aa14.53□□□□□ -0.08
CLK1-211ENST00000481641 RRP9O43818 475 aaKnown RBP14.52□□□□□ -0.09
CLK1-211ENST00000481641 VDAC1P21796 283 aa14.52□□□□□ -0.09
CLK1-211ENST00000481641 RPS27AP62979 156 aaKnown RBP14.52□□□□□ -0.09
CLK1-211ENST00000481641 HTD2P86397 168 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms